ID A0A0D9R8Q5_CHLSB Unreviewed; 376 AA.
AC A0A0D9R8Q5;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE RecName: Full=RNA binding protein fox-1 homolog 1 {ECO:0000256|PIRNR:PIRNR037932};
GN Name=RBFOX1 {ECO:0000313|Ensembl:ENSCSAP00000004994.1};
OS Chlorocebus sabaeus (Green monkey) (Cercopithecus sabaeus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini;
OC Cercopithecidae; Cercopithecinae; Chlorocebus.
OX NCBI_TaxID=60711 {ECO:0000313|Ensembl:ENSCSAP00000004994.1, ECO:0000313|Proteomes:UP000029965};
RN [1] {ECO:0000313|Ensembl:ENSCSAP00000004994.1, ECO:0000313|Proteomes:UP000029965}
RP NUCLEOTIDE SEQUENCE.
RA Warren W., Wilson R.K.;
RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSCSAP00000004994.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- FUNCTION: RNA-binding protein that regulates alternative splicing
CC events. {ECO:0000256|PIRNR:PIRNR037932}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PIRNR:PIRNR037932}.
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DR EMBL; AQIB01118095; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AQIB01118096; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; A0A0D9R8Q5; -.
DR SMR; A0A0D9R8Q5; -.
DR STRING; 60711.ENSCSAP00000004994; -.
DR Ensembl; ENSCSAT00000006799.1; ENSCSAP00000004994.1; ENSCSAG00000008739.1.
DR eggNOG; KOG0125; Eukaryota.
DR GeneTree; ENSGT00940000160685; -.
DR OMA; MNCLSSQ; -.
DR Proteomes; UP000029965; Chromosome 5.
DR Bgee; ENSCSAG00000008739; Expressed in caudate nucleus and 4 other cell types or tissues.
DR GO; GO:0010494; C:cytoplasmic stress granule; IEA:Ensembl.
DR GO; GO:0097165; C:nuclear stress granule; IEA:Ensembl.
DR GO; GO:0005802; C:trans-Golgi network; IEA:Ensembl.
DR GO; GO:0003730; F:mRNA 3'-UTR binding; IEA:Ensembl.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0007399; P:nervous system development; IEA:InterPro.
DR GO; GO:0050885; P:neuromuscular process controlling balance; IEA:Ensembl.
DR GO; GO:0000381; P:regulation of alternative mRNA splicing, via spliceosome; IEA:Ensembl.
DR GO; GO:2001014; P:regulation of skeletal muscle cell differentiation; IEA:Ensembl.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR CDD; cd12407; RRM_FOX1_like; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR025670; Fox-1_C_dom.
DR InterPro; IPR034237; FOX1_RRM.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR017325; RBFOX1-3.
DR InterPro; IPR047131; RBFOX1-like.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR15597; ATAXIN 2-BINDING PROTEIN 1-RELATED; 1.
DR PANTHER; PTHR15597:SF45; RNA BINDING PROTEIN FOX-1 HOMOLOG 1; 1.
DR Pfam; PF12414; Fox-1_C; 1.
DR Pfam; PF00076; RRM_1; 1.
DR PIRSF; PIRSF037932; Ataxin_2_bd_A2BP; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW mRNA processing {ECO:0000256|PIRNR:PIRNR037932};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187,
KW ECO:0000256|PIRNR:PIRNR037932}; Nucleus {ECO:0000256|PIRNR:PIRNR037932};
KW Reference proteome {ECO:0000313|Proteomes:UP000029965};
KW RNA-binding {ECO:0000256|PIRNR:PIRNR037932, ECO:0000256|PIRSR:PIRSR037932-
KW 1}.
FT DOMAIN 119..195
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 1..126
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 57..121
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT SITE 120
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT SITE 128
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT SITE 129
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT SITE 153
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT SITE 158
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT SITE 162
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT SITE 186
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT SITE 196
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
SQ SEQUENCE 376 AA; 40538 MW; 0EB5A82317856BDF CRC64;
MEEKGSRMVQ QGNQEAAAAP DTMAQPYASA QFAPPQNGIP AEYTAPHPHP APEYTGQTTV
PEHTLNLYPP AQTHSEQSPA DTSAQTVSGT ATQTDDAAPT DGQPQTQPSE NTENKSQPKR
LHVSNIPFRF RDPDLRQMFG QFGKILDVEI IFNERGSKGF GFVTFENSAD ADRAREKLHG
TVVEGRKIEV NNATARVMTN KKTVNPYTNG WKLNPVVGAV YSPEFYAGTV LLCQANQEGS
SMYSAPSSLV YTSAMPGFPY PAATAAAAYR GAHLRGRGRT VYNTFRAAAP PPPIPAYGGV
VYQDGFYGAD IYGGYAAYRY AQPTPATAAA YSDRNQFVFV AADEISCNTS AVTDEFMLPT
PTTTHLLQPP PTALVP
//