ID A0A0D9V1G9_9ORYZ Unreviewed; 553 AA.
AC A0A0D9V1G9;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE RecName: Full=TATA box binding protein associated factor (TAF) histone-like fold domain-containing protein {ECO:0000259|SMART:SM00803};
OS Leersia perrieri.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Leersia.
OX NCBI_TaxID=77586 {ECO:0000313|EnsemblPlants:LPERR01G15280.1, ECO:0000313|Proteomes:UP000032180};
RN [1] {ECO:0000313|EnsemblPlants:LPERR01G15280.1, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:LPERR01G15280.1, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Yu Y., Lee S., de Baynast K., Wissotski M., Liu L., Talag J.,
RA Goicoechea J., Angelova A., Jetty R., Kudrna D., Golser W., Rivera L.,
RA Zhang J., Wing R.;
RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:LPERR01G15280.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the TAF6 family.
CC {ECO:0000256|ARBA:ARBA00007688}.
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DR AlphaFoldDB; A0A0D9V1G9; -.
DR STRING; 77586.A0A0D9V1G9; -.
DR EnsemblPlants; LPERR01G15280.1; LPERR01G15280.1; LPERR01G15280.
DR Gramene; LPERR01G15280.1; LPERR01G15280.1; LPERR01G15280.
DR eggNOG; KOG2549; Eukaryota.
DR HOGENOM; CLU_021711_1_0_1; -.
DR Proteomes; UP000032180; Chromosome 1.
DR GO; GO:0000124; C:SAGA complex; IEA:InterPro.
DR GO; GO:0046695; C:SLIK (SAGA-like) complex; IEA:InterPro.
DR GO; GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0016251; F:RNA polymerase II general transcription initiation factor activity; IEA:InterPro.
DR GO; GO:0006367; P:transcription initiation at RNA polymerase II promoter; IEA:InterPro.
DR CDD; cd08050; TAF6C; 1.
DR Gene3D; 1.10.20.10; Histone, subunit A; 1.
DR Gene3D; 1.25.40.770; TAF6, C-terminal HEAT repeat domain; 1.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR009072; Histone-fold.
DR InterPro; IPR037796; TAF6.
DR InterPro; IPR011442; TAF6_C.
DR InterPro; IPR046344; TAF6_C_sf.
DR InterPro; IPR004823; TAF_TATA-bd_Histone-like_dom.
DR PANTHER; PTHR10221; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6; 1.
DR PANTHER; PTHR10221:SF9; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6; 1.
DR Pfam; PF02969; TAF; 1.
DR Pfam; PF07571; TAF6_C; 1.
DR SMART; SM00803; TAF; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR SUPFAM; SSF47113; Histone-fold; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000032180};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 2..68
FT /note="TATA box binding protein associated factor (TAF)
FT histone-like fold"
FT /evidence="ECO:0000259|SMART:SM00803"
FT REGION 419..453
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 419..448
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 553 AA; 61751 MW; F9BD842512E853B8 CRC64;
MSIVPKETIE VIAQSVGIVS LPADVSAALA PDVEYRLREI MQEAIKCMRH AKRTVLTADD
VDSALSLRNV EPVYGFASGD PLRFKRAVGH KDLFYIDDRE VDFKEIIEAP LPKAPLDTAV
VAHWLAIEGI QPAIPENPPV DAIVAPTENK RTEHGKDDGL TADIKLPVKH VLSRELQMYF
DKIAELTMSR SETSVFREAL VSLSRDSGLH PLVPYFSYFI ADEVTRSLGD LPVLFALMRV
VQSLLHNPHI HIEPYLHQLM PSMITCIVAK RLGHRLSDNH WELRDFSANL VASVCRRFGH
VYHNLQTRLT KTLIHAFLDP QKSLTQHYGA VQGISALGPS AIRLLLLPNL ETYMQLLEPE
LQLEKQKNEM KRKEAWRVYG ALLLTCRCIF QCAAGKCLYD RLKLFPNLLS SSMRPLLRSN
KRVMTNNPNK RKSSTDISAS QPPQKKMATD GGMNSMASPP MAGNMPGTMD GFSTQLTNPS
MMQASSSGQL VESTASGVIR RDQGSNHPQR VSTVLRLAWK EDQNAGHLLS SLYEIFGEAI
LSFVQPPEIS FFL
//
