ID A0A0D9V1N7_9ORYZ Unreviewed; 1209 AA.
AC A0A0D9V1N7;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 35.
DE RecName: Full=RNA-dependent RNA polymerase {ECO:0000256|RuleBase:RU363098};
DE EC=2.7.7.48 {ECO:0000256|RuleBase:RU363098};
OS Leersia perrieri.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Leersia.
OX NCBI_TaxID=77586 {ECO:0000313|EnsemblPlants:LPERR01G15890.1, ECO:0000313|Proteomes:UP000032180};
RN [1] {ECO:0000313|EnsemblPlants:LPERR01G15890.1, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:LPERR01G15890.1, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Yu Y., Lee S., de Baynast K., Wissotski M., Liu L., Talag J.,
RA Goicoechea J., Angelova A., Jetty R., Kudrna D., Golser W., Rivera L.,
RA Zhang J., Wing R.;
RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:LPERR01G15890.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- FUNCTION: Probably involved in the RNA silencing pathway and required
CC for the generation of small interfering RNAs (siRNAs).
CC {ECO:0000256|RuleBase:RU363098}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.48; Evidence={ECO:0000256|ARBA:ARBA00024517,
CC ECO:0000256|RuleBase:RU363098};
CC -!- SIMILARITY: Belongs to the RdRP family. {ECO:0000256|ARBA:ARBA00005762,
CC ECO:0000256|RuleBase:RU363098}.
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DR AlphaFoldDB; A0A0D9V1N7; -.
DR STRING; 77586.A0A0D9V1N7; -.
DR EnsemblPlants; LPERR01G15890.1; LPERR01G15890.1; LPERR01G15890.
DR Gramene; LPERR01G15890.1; LPERR01G15890.1; LPERR01G15890.
DR eggNOG; KOG0988; Eukaryota.
DR HOGENOM; CLU_001366_3_1_1; -.
DR Proteomes; UP000032180; Chromosome 1.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003968; F:RNA-dependent RNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0031047; P:regulatory ncRNA-mediated gene silencing; IEA:UniProtKB-KW.
DR InterPro; IPR007855; RNA-dep_RNA_pol_euk-typ.
DR PANTHER; PTHR23079; RNA-DEPENDENT RNA POLYMERASE; 1.
DR PANTHER; PTHR23079:SF18; RNA-DEPENDENT RNA POLYMERASE 6; 1.
DR Pfam; PF05183; RdRP; 1.
PE 3: Inferred from homology;
KW Nucleotidyltransferase {ECO:0000256|RuleBase:RU363098};
KW Reference proteome {ECO:0000313|Proteomes:UP000032180};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|RuleBase:RU363098};
KW RNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022484,
KW ECO:0000256|RuleBase:RU363098};
KW RNA-mediated gene silencing {ECO:0000256|RuleBase:RU363098};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|RuleBase:RU363098}.
SQ SEQUENCE 1209 AA; 136085 MW; 307B9CB641B87952 CRC64;
MRSPARRRRG GEAAAAADLV TTQVGLGGFD AGVTAAKLAD FLEHEAGQVW RCRVKTSWTP
PDSYPDFSLP VAASALPPPP RFDRVPPHAF VHFARPEGAR RAADAAGRCE LILGGKSLIV
SSAPESTLRV SRRRSTEPFR FPGVRLEAGS LPSHDAFLAA WRGPTGEGDV AFSVDPFDGS
CRFVFARDTA FAFPGFRETA VVRCDVKLEF PVRDVAEVRI YRLDCSLLLR LAAAPLVYYR
TADDDFHESV PFDLLDDDDP WIRTTDFTPS GAIGRSGVYR ISFSARFWPK MDRALDYMRE
RRVPIVDCGG DWGPRRGLAV LDEPDFGEPM QDVFFCLQHV EGLGFPVLFL VNALVHKGII
NQHQLTPEFF GLLRRREENV NVAALRDFWG DKFPVFDACG RLKKALGRVA RNPKLLCSKI
GDDNAEVRRL VITPTRAYCL PPEVERSNRV LRHYHEVADR FLRVTFMDEG MELLNTHVLN
SFTAPIVKDL MSNFFQQKTT VYKRVRMLLA EGFHMCGRKY SFLAFSSNQL RDRSAWFFAE
DRKTTVEGIR KWMGRFTSKN VAKHAARMGQ CFSSTFATVT VQPDEVDETF EDVVHNKYVF
SDGIGKITPD LALEVAERLQ LTDNPPSAYQ IRYAGFKGVI AVWEGRGDGI RLSLRPSMRK
FESKHSVLEV VSWTKFQPGF LNRQIITLLS SLNVPDAIFS QMQETMLSNL NNILSDRDVA
FEVVTSSCVE NENTAALMLS AGFEPGTEPH LKGMLLAIRS AQLQDLLTKA RIFVPKGRWL
MGCFDELGVL EQGQCFIRAS TPSLKSYFVK HGSRFSSTDR NTQVIVGTVV MAKNPCLHPG
DIRILEAVDV LELHHLVDCL VFPQKGERPH ANEASGSDLD GDLYFVTWDE KLVPPGKKSW
NPMDYSPPEA KQLPRQVSPH DIVDFFLKNM ISENLGKICN AHVVHADLSE YGAMDEKCIN
LAELAATAVD FPKTGKLAIM PQHLKPKVYP DFMGKEDVIS YKSEKILGRL YRSIQEASNG
DVLSEEVCTP NDLPYDIDLE VPGASDFLAS AWQCKCSYEA QLSALLNQYK VRTEAELVTG
HITSVTKYNS KKQGDIKERL KNGYSALRKE FRSTFESISS DQCEFSEDEK NHLYEMKASA
WYQVTYHPKW IEKSRDMVGP DGEEMPSRLS FAWIAVDYLA RIKLRCHGKV RVEGQRPVER
LAAYISERI
//