ID A0A0D9V5Z4_9ORYZ Unreviewed; 1041 AA.
AC A0A0D9V5Z4;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE RecName: Full=RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483};
DE EC=2.3.2.27 {ECO:0000256|ARBA:ARBA00012483};
OS Leersia perrieri.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Leersia.
OX NCBI_TaxID=77586 {ECO:0000313|EnsemblPlants:LPERR01G27300.1, ECO:0000313|Proteomes:UP000032180};
RN [1] {ECO:0000313|EnsemblPlants:LPERR01G27300.1, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:LPERR01G27300.1, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Yu Y., Lee S., de Baynast K., Wissotski M., Liu L., Talag J.,
RA Goicoechea J., Angelova A., Jetty R., Kudrna D., Golser W., Rivera L.,
RA Zhang J., Wing R.;
RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:LPERR01G27300.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- FUNCTION: Seed storage protein. {ECO:0000256|ARBA:ARBA00003839,
CC ECO:0000256|RuleBase:RU003681}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine +
CC [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-
CC cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.;
CC EC=2.3.2.27; Evidence={ECO:0000256|ARBA:ARBA00000900};
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC {ECO:0000256|ARBA:ARBA00004906}.
CC -!- SUBUNIT: Hexamer; each subunit is composed of an acidic and a basic
CC chain derived from a single precursor and linked by a disulfide bond.
CC {ECO:0000256|ARBA:ARBA00011818, ECO:0000256|RuleBase:RU003681}.
CC -!- SIMILARITY: Belongs to the 11S seed storage protein (globulins) family.
CC {ECO:0000256|ARBA:ARBA00007178, ECO:0000256|RuleBase:RU003681}.
CC -!- SIMILARITY: Belongs to the SINA (Seven in absentia) family.
CC {ECO:0000256|ARBA:ARBA00009119}.
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DR AlphaFoldDB; A0A0D9V5Z4; -.
DR STRING; 77586.A0A0D9V5Z4; -.
DR EnsemblPlants; LPERR01G27300.1; LPERR01G27300.1; LPERR01G27300.
DR Gramene; LPERR01G27300.1; LPERR01G27300.1; LPERR01G27300.
DR eggNOG; KOG3002; Eukaryota.
DR HOGENOM; CLU_292624_0_0_1; -.
DR UniPathway; UPA00143; -.
DR Proteomes; UP000032180; Chromosome 1.
DR GO; GO:0045735; F:nutrient reservoir activity; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR GO; GO:0048316; P:seed development; IEA:UniProt.
DR CDD; cd02243; cupin_11S_legumin_C; 2.
DR CDD; cd02242; cupin_11S_legumin_N; 2.
DR CDD; cd16571; RING-HC_SIAHs; 1.
DR Gene3D; 2.60.120.10; Jelly Rolls; 4.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR022379; 11S_seedstore_CS.
DR InterPro; IPR006044; 11S_seedstore_pln.
DR InterPro; IPR006045; Cupin_1.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR011051; RmlC_Cupin_sf.
DR InterPro; IPR049548; Sina-like_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR013010; Znf_SIAH.
DR PANTHER; PTHR31189:SF84; GLUTELIN TYPE-B 2; 1.
DR PANTHER; PTHR31189; OS03G0336100 PROTEIN-RELATED; 1.
DR Pfam; PF00190; Cupin_1; 4.
DR Pfam; PF21362; Sina_RING; 1.
DR Pfam; PF21361; Sina_ZnF; 1.
DR PRINTS; PR00439; 11SGLOBULIN.
DR SMART; SM00835; Cupin_1; 4.
DR SUPFAM; SSF51182; RmlC-like cupins; 2.
DR PROSITE; PS00305; 11S_SEED_STORAGE; 2.
DR PROSITE; PS51081; ZF_SIAH; 1.
PE 3: Inferred from homology;
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157,
KW ECO:0000256|RuleBase:RU003681};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00455};
KW Reference proteome {ECO:0000313|Proteomes:UP000032180};
KW Seed storage protein {ECO:0000256|ARBA:ARBA00023129,
KW ECO:0000256|RuleBase:RU003681}; Signal {ECO:0000256|RuleBase:RU003681};
KW Storage protein {ECO:0000256|ARBA:ARBA00022761,
KW ECO:0000256|RuleBase:RU003681};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Ubl conjugation pathway {ECO:0000256|ARBA:ARBA00022786};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00455};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00455}.
FT SIGNAL 1..24
FT /evidence="ECO:0000256|RuleBase:RU003681"
FT CHAIN 25..1041
FT /note="RING-type E3 ubiquitin transferase"
FT /evidence="ECO:0000256|RuleBase:RU003681"
FT /id="PRO_5007746256"
FT DOMAIN 570..628
FT /note="SIAH-type"
FT /evidence="ECO:0000259|PROSITE:PS51081"
SQ SEQUENCE 1041 AA; 117115 MW; 51422D25C6B11DC6 CRC64;
MSAMKLPVVF SVICLFLLCH GSLAQFQSQS TSQWQSSRRG SPRECRFDQL QALEPVRTVR
SQAGCFNVPE YLLCVELLNL EVLLPHYSNG ATLVYIIQGR GITGPTFPGC PETYQQQFQQ
SEQVQSFEAQ SQSHKFRDEH QKIHRFRQGD VVALPAGVAH WCYNDGEVPI VAIYVTDIHN
SANQLDPRHR DFFLAGNNKI GQQFYRSETR ESSKNIFGGF SVELLSEAIG ISSGVARQLQ
CQNDQRGEIV RVERGLELLQ PYASLQEQEQ EQQQQQQVQL SEYGQTQYEQ KQLRGGCSNG
LDETFCTMRV RQNIDNPNLA DTYNPRAGRI TYLNAKKFPI LNLLQMSAVK VNLYQNALLS
PFWNINAHSI VYITQGRARV QVVNNNGKTV FDGELRHGQL LIVPQHHVVL KKAQREGCSY
IAFKTNPNSI VSHIAGKNSI FRALPNDVVA NAYRISREEA QRIKHNRGDE SGVFTPSHAY
KSFQDIMTQE ETQPMEQSAG HRSSVVGIDL ELLDCTICSH PLKRPVFQCR VGHVLCSSCH
GKLPDKKNCH TCSRDTGYDR CYAVEKILES IRVPCRNAAY GCDTKTACHE RESHEDACPH
APCFCPEPRC GFAGATPALL AHLTGVHGCP PSRGITGPTF PGCPETYQQQ FQQSEQVQSF
EAQSQSHKFR DEHQKIHRFR QGDVVALPAG VAHWCYNDGE VPIVAIYVTD IHNSANQLDP
RHRDFFLAGN NKIGQQFYRS ETRESSKNIF GGFSVELLSE AFGISSGVAR QLQCQNDQRG
EIVRVERGLE LLQPYASLQE QEQQQQQQVQ PSEYGQTQYE QKQLRGGCSN GLDETFCTMR
VRQNIDNPNL ADTYNPRAGR ITYLNAQKFP ILNLLQMSAV KVNLYQNALL SPFWNINAHS
IVYITQGRAR VQVVNNNGKT VFDGELRHGQ LLIIPQHHVV LKKAQREGCS YIAFKTNPNS
IVSHIAGKNS IFRALPNDVV ANAYHISREE AKRIKHNRGD ESGVFTPSHA YRSFQDIMTA
SSPAPAVETG ALQRCIKVRR G
//
