ID   A0A0D9W971_9ORYZ        Unreviewed;       859 AA.
AC   A0A0D9W971;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   24-JAN-2024, entry version 32.
DE   RecName: Full=Nucleoporin Nup88 {ECO:0008006|Google:ProtNLM};
OS   Leersia perrieri.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Leersia.
OX   NCBI_TaxID=77586 {ECO:0000313|EnsemblPlants:LPERR04G20240.2, ECO:0000313|Proteomes:UP000032180};
RN   [1] {ECO:0000313|EnsemblPlants:LPERR04G20240.2, ECO:0000313|Proteomes:UP000032180}
RP   NUCLEOTIDE SEQUENCE.
RA   Wing R.A.;
RT   "Oryza genome evolution.";
RL   Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:LPERR04G20240.2, ECO:0000313|Proteomes:UP000032180}
RP   NUCLEOTIDE SEQUENCE.
RA   Yu Y., Lee S., de Baynast K., Wissotski M., Liu L., Talag J.,
RA   Goicoechea J., Angelova A., Jetty R., Kudrna D., Golser W., Rivera L.,
RA   Zhang J., Wing R.;
RL   Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EnsemblPlants:LPERR04G20240.2}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus, nuclear pore complex
CC       {ECO:0000256|ARBA:ARBA00004567}.
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DR   AlphaFoldDB; A0A0D9W971; -.
DR   STRING; 77586.A0A0D9W971; -.
DR   EnsemblPlants; LPERR04G20240.1; LPERR04G20240.1; LPERR04G20240.
DR   EnsemblPlants; LPERR04G20240.2; LPERR04G20240.2; LPERR04G20240.
DR   Gramene; LPERR04G20240.1; LPERR04G20240.1; LPERR04G20240.
DR   Gramene; LPERR04G20240.2; LPERR04G20240.2; LPERR04G20240.
DR   eggNOG; KOG4460; Eukaryota.
DR   HOGENOM; CLU_023826_0_0_1; -.
DR   Proteomes; UP000032180; Chromosome 4.
DR   GO; GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
DR   GO; GO:0017056; F:structural constituent of nuclear pore; IEA:InterPro.
DR   GO; GO:0045087; P:innate immune response; IEA:EnsemblPlants.
DR   GO; GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
DR   GO; GO:0006611; P:protein export from nucleus; IEA:EnsemblPlants.
DR   GO; GO:0000055; P:ribosomal large subunit export from nucleus; IEA:InterPro.
DR   GO; GO:0000056; P:ribosomal small subunit export from nucleus; IEA:InterPro.
DR   GO; GO:0009627; P:systemic acquired resistance; IEA:EnsemblPlants.
DR   InterPro; IPR019321; Nucleoporin_Nup88.
DR   InterPro; IPR037700; NUP88/NUP82.
DR   PANTHER; PTHR13257:SF0; NUCLEAR PORE COMPLEX PROTEIN NUP88; 1.
DR   PANTHER; PTHR13257; NUCLEOPORIN NUP84-RELATED; 1.
DR   Pfam; PF10168; Nup88; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   mRNA transport {ECO:0000256|ARBA:ARBA00022816};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW   Reference proteome {ECO:0000313|Proteomes:UP000032180};
KW   Translocation {ECO:0000256|ARBA:ARBA00023010};
KW   Transport {ECO:0000256|ARBA:ARBA00022448}.
FT   REGION          1..73
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          696..723
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        1..24
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        29..65
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   859 AA;  93644 MW;  AB2F5BA68F0D3EC7 CRC64;
     MTRITAPPPP SSPPSSPPPL RHSPAQGTPL SRRRHSPSPS LALTPSSAST SAAAAAASSS
     SRPKARPSPR RAYAAAQWVS LPSHPAFSRG GDAGEGGGGG GGAAWDAAAS RLYVWDPSAR
     GVHRVSVRVR DAEAGKDGED VAVEAALPSE MLMLEPDLGY KVTHISLNTD GSSLLLTGSH
     NISVMYVHER VSEDGDKIIC RTVPVASQIL PSNNDGIKVL QTLWHPFSSS HFGVLTSDAV
     FRLFDLSFDL EQPEQEFYLQ PILPGKCQNA SSICPVAFSY GSDHLWDRFS VFILFSDGSI
     FVLCPVVPFG SDYNKKHIQE IYEDVNTFGL KSSNQNLVTN SHLAIAWLEA TFPDLLHQPA
     DTNALMSRAH PYASLDDSLT LQGPLCRVCE ENSEPESKSG SCEGKAVDFV YSSVGKDSVL
     VTAWGSGQLQ IDALADEIQP QWSIGIPTRV NVDSHGQIKS VAMICDSNSE DSWAMQSYRP
     SSTGSNVKSN TEAVWMGHSP PLLRLAIVDL ALPKTSSDSS LSLFLDPLVP ERFYCAHGGG
     LDMVTLHFLP FSYPEMASTP PSVHPILTTG NSETNSPFLS GFVTISDVYG HVQLVSISCL
     GECFVVEMKG WKEPTPLQLD IESKSIKDVE SFTTGMISKE LITGPDPPIV PSSSSLRSLT
     PDSIEGKSTL HHYIKVFHEY YVEYGHKVFI ELKEHADYLK TEIEDKQKRL QAVKQSLLSI
     EAKDNDINSR INRAFKVYDL LEKRIEGFKI LPAANKKPLS RAEQEFKAQL DRFANVELDA
     LRSSITALSA RMKRIAHPSI GSAAGTGMLS WHTPKGGRSN VSDSQMSLLK SSLERLSILN
     EENNQKLKLI EHELKNQEQ
//