ID A0A0D9W982_9ORYZ Unreviewed; 1302 AA.
AC A0A0D9W982;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 32.
DE RecName: Full=PHD-type domain-containing protein {ECO:0000259|PROSITE:PS50016};
OS Leersia perrieri.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Leersia.
OX NCBI_TaxID=77586 {ECO:0000313|EnsemblPlants:LPERR04G20340.1, ECO:0000313|Proteomes:UP000032180};
RN [1] {ECO:0000313|EnsemblPlants:LPERR04G20340.1, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:LPERR04G20340.1, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Yu Y., Lee S., de Baynast K., Wissotski M., Liu L., Talag J.,
RA Goicoechea J., Angelova A., Jetty R., Kudrna D., Golser W., Rivera L.,
RA Zhang J., Wing R.;
RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:LPERR04G20340.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the SBNO family.
CC {ECO:0000256|ARBA:ARBA00006992}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EnsemblPlants; LPERR04G20340.1; LPERR04G20340.1; LPERR04G20340.
DR Gramene; LPERR04G20340.1; LPERR04G20340.1; LPERR04G20340.
DR eggNOG; KOG1513; Eukaryota.
DR HOGENOM; CLU_000212_2_1_1; -.
DR Proteomes; UP000032180; Chromosome 4.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR026937; SBNO_Helicase_C_dom.
DR InterPro; IPR026741; SNO.
DR InterPro; IPR039187; SNO_AAA.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR12706:SF13; PROTEIN FORGETTER 1; 1.
DR PANTHER; PTHR12706; STRAWBERRY NOTCH-RELATED; 1.
DR Pfam; PF13872; AAA_34; 1.
DR Pfam; PF13871; Helicase_C_4; 1.
DR Pfam; PF00628; PHD; 1.
DR SMART; SM00249; PHD; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000032180};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 725..775
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT REGION 45..100
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 149..174
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 700..723
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 47..67
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 154..174
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1302 AA; 142539 MW; C7EE70477B687A49 CRC64;
MAGGSSPSPS AAPVQVRCAG CRGVLAVAPG MTEFICPKCG MAQRLPPQLM PPKPTPPPPP
TSSSSSPSPA PPKSSSASAP APARRGAAPA PAPTPQAQGV DPTKIQLPCA NCQAVLNVPH
GLARFRCPQC GAELAVDLAK LHNFLASSNN NSAAPPPPTD PASRPALRAP PSVPVPPPQA
PFLPAPTPGM TQAPQLVPGA LIPMVLPITD PPEEINEVAI DVEREEDEGG TVGETFTDYR
PPKLSLGLPH PDPIVETSSL SAVQPPEPTY SLNIMDELDE TKALSCLQIE TLVYACQRHL
YHLPTGDRAG FFIGDGAGVG KGRTIAGLIW ENWQQGRHKA VWVSIGSDLK YDARRDLDDV
GAKCVQVHPL NKLPYSKLDS KAIGIKNGVI FVTYSSLIAS SERGRSRLQQ LVQWCGNEFD
GLLVFDECHK AKNLVPDAGS QPTRTGKAVL EIQEKLPEAR VVYCSATGAS EPRNLGYMVR
LGLWGDGTSF QNFAQFLGSL EKGGVGALEL VAMDMKARGM YVCRTLSYKG VDFDIVEAPL
EERMMNMYGK AAEFWAEFRL ELLSAGDLVT EGISNQIWRL YWASHQRFFR HMCMSAKVPG
VVRLAKEALA ENKCVVVGLQ STGEARTEEA ITKYGVEMED FVSGPRELLL KLVEENYPLP
PKPDSFQQGE EKVTEIHRKR HSAQDVSFKG RVRKVAKVVE VSDDDSDDYS PSESDHGSTE
SDEEFHMCQI CNTEEEKSLL LHCSGCSRHV HPACLTPPWT GILTDDWSCY TCKKLEGDEN
EQDAHVADFS QRYDAAVERK MKILDMIRSL DLPNNPLDDI IDQLGGPDNV AEITGRRGML
IRASDGKGVV YQARNAKEVS MEMINMHEKQ QFMDGKKLIA IISEAGSAGV SLHADRRAKN
QRRRVHITLE LPWSADRAIQ QFGRTHRSNQ TSAPQYRLLF TNLGGEKRFA SIVAKRLETL
GALTQGDRRA GPSLSAFNYD SNYGKKALTI MYRGIMEQDS FPVVPPGCFD NETSIQEFIA
EAKAALVSVG IIRDAVVCNG KVAVKLSGRI VDSDMHDVAR FLNRLLGLAP KIQNSILDVV
LHNARIEGQL DSGIVDIKAK NTVHIDSLSG ASTVLFTFTI DRGVTWESAK AMLDERQRDG
ASSSNDGFYE SKREWMGRRH FTLAFEGSIE GMYKIIRPAV GEALREMPLT ELKSKYRKVS
SIEKVNKGWQ DEYDASSKQC MHGSKCKVGS YCTVGRRLQE VNILGGLILP VWGTIEKALA
KQVRQSHKRV RVVRLETTND NKRIVGLLIP NSAVESVLTG LF
//