ID A0A0D9WUG5_9ORYZ Unreviewed; 1740 AA.
AC A0A0D9WUG5;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE RecName: Full=[Histone H3]-trimethyl-L-lysine(4) demethylase {ECO:0008006|Google:ProtNLM};
OS Leersia perrieri.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Leersia.
OX NCBI_TaxID=77586 {ECO:0000313|EnsemblPlants:LPERR06G23820.2, ECO:0000313|Proteomes:UP000032180};
RN [1] {ECO:0000313|EnsemblPlants:LPERR06G23820.2, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:LPERR06G23820.2, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Yu Y., Lee S., de Baynast K., Wissotski M., Liu L., Talag J.,
RA Goicoechea J., Angelova A., Jetty R., Kudrna D., Golser W., Rivera L.,
RA Zhang J., Wing R.;
RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:LPERR06G23820.2}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- COFACTOR:
CC Name=Fe(2+); Xref=ChEBI:CHEBI:29033;
CC Evidence={ECO:0000256|ARBA:ARBA00001954};
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DR STRING; 77586.A0A0D9WUG5; -.
DR EnsemblPlants; LPERR06G23820.2; LPERR06G23820.2; LPERR06G23820.
DR Gramene; LPERR06G23820.2; LPERR06G23820.2; LPERR06G23820.
DR eggNOG; KOG1246; Eukaryota.
DR HOGENOM; CLU_000946_1_0_1; -.
DR Proteomes; UP000032180; Chromosome 6.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0010468; P:regulation of gene expression; IEA:UniProt.
DR CDD; cd16100; ARID; 1.
DR CDD; cd15543; PHD_RSF1; 1.
DR Gene3D; 1.10.150.60; ARID DNA-binding domain; 1.
DR Gene3D; 2.60.120.650; Cupin; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 3.
DR InterPro; IPR001606; ARID_dom.
DR InterPro; IPR036431; ARID_dom_sf.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR003349; JmjN.
DR InterPro; IPR013637; Lys_sp_deMease-like_dom.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR10694; LYSINE-SPECIFIC DEMETHYLASE; 1.
DR PANTHER; PTHR10694:SF133; LYSINE-SPECIFIC DEMETHYLASE LID; 1.
DR Pfam; PF01388; ARID; 1.
DR Pfam; PF02373; JmjC; 1.
DR Pfam; PF02375; JmjN; 1.
DR Pfam; PF00628; PHD; 2.
DR Pfam; PF08429; PLU-1; 1.
DR SMART; SM01014; ARID; 1.
DR SMART; SM00501; BRIGHT; 1.
DR SMART; SM00558; JmjC; 1.
DR SMART; SM00545; JmjN; 1.
DR SMART; SM00249; PHD; 3.
DR SUPFAM; SSF46774; ARID-like; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 3.
DR PROSITE; PS51011; ARID; 1.
DR PROSITE; PS51184; JMJC; 1.
DR PROSITE; PS51183; JMJN; 1.
DR PROSITE; PS01359; ZF_PHD_1; 2.
DR PROSITE; PS50016; ZF_PHD_2; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000032180};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 8..49
FT /note="JmjN"
FT /evidence="ECO:0000259|PROSITE:PS51183"
FT DOMAIN 77..175
FT /note="ARID"
FT /evidence="ECO:0000259|PROSITE:PS51011"
FT DOMAIN 252..302
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 393..559
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
FT DOMAIN 1606..1653
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT REGION 176..215
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 1146..1173
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1740 AA; 197120 MW; 733ED4E0ACA3145F CRC64;
MGLSVPEAPV FRPTEEEFGD PLAYVARIRP LAEPYGICRI VPPPSWSPPP GQAMDVSSLS
FPTKRQPIHR LLARPAPADP DTFLLDYRRF LRRHRNRHKS KSPPALSDGR PLDLCRLFHA
VKRFGGYDGA CAAKRWGDVV RLVDDRAPRH MSQCAKHVIA QLYYDHLYHY EQFTNTQKQQ
GESDDPPSQD GARDNDSDSG REVSSSSIRT QKRRNSIIRK TTRMAAYSSA AAPKRKRRKA
DAMPAVLNEA MDQVCEQCNS GLHGDVMLLC DRCDKGWHLY CLSPPLQTVP PGNWYCSECM
NSDSNCFGFV HRRKNCQLET LRRFDDRVRK RWFGHKSPSH AQVEKQFWEI VEGKAGELEV
MYGSDLDTSI YGSGFPRLCD SVPSSVDPVM WHKYCSSPWN LNNFPNLPGS VLRTVRDNIA
GVMVPWLYIG MLFSSFCWHV EDHCFYSINY LHWGEPKCWY GVPGAEANAF EQVMRNALPD
LFDAQPDLLF HLVTMLNPSI LQANGVPVYS VIQEPGNFVI TFPRSFHGGF NFGLNCAEAV
NFAPADWLPH GGIGAELYRL YRKAPVLSHE ELLYVVAKNG VENESLSYLL GEIERLFVKE
KKCREELWVN GIIKSSLMPP KKNPNFIGSE EHWKHLCECS PEKHRLLYRH TLAELGDLVC
EVTKASLPQE NVKQNSLLHN DVCLPMRKDK DHYMSFTQLA EVWLSKADHI LRVPFLDTAY
VTALEDAEQF LWGDHNMDSV RNMSAKLIEG KKWASSVRKC ISKIDGFLHF KGNCSEKVYV
DKGEIMINEI KNALSSHSMV DYLETLYYRA LEFPVDLTET SALSCELSSA KSWLKKACDC
LKHNKRGIID IDFLNELKSK MACLRVSAPE IKLVSELWKE AEAWRIRCQS YLQDTPSLKE
LESFLHVVDG ANFSIPELNI LKQRHSGACS WVNRANSIVG KLLERSDYHN IVEELTRILM
DGESLGEFPI IEQELKKSIC RKQASEALAT PTSMEVVKEV LKEASTLTIE EEQPFVDLSY
QLKTAITWEE NAGFILKHSA PLSEFEAHIQ CSENIHVILP SELDMKAEVA TAKLWMDKCQ
AYLRPSSDNS VSGCLKVDDL KDLISQPASI KVILDTSAIN SVLNNVVEWE HNSLSLIYSS
KTLLDLNVID STIDPLKRKL EELQEKINAG IKKGLSLGFE FKDVERLIQQ AVNLPASLSG
CSLAELLMRG SCWLRKALLF LPDSEMSEID VPYPMMIAKL EDAIDKHNSW AEQCNAFFMS
PDHQSWAGLL RLRDSGQSVA FDCTEMDKVV LEIKKIEEWL TYCHFMLFPD GNNNDSLHST
LLKIRGSMDG AYMLYTEGCN QKGLCAICCC DVGDDITSRC VICQDRYHNP CVEPLLSSAQ
VTPTHEWTCP FCFPLESGDA LQNGLREKIS KGNRPSLPAL IELHSSAKGF YSGIEELDLL
DEITEKAHKF KSYLMQILHN ADSCHGEDLS VMHRSLLVAL KATSAAGLYD HQISCRIDSM
FSRYSWKKRI HTLLCGGKKI SIQQVLSLDN EGSSLEICGE DFFKLKINKI KETSLQWLAK
AEKTTLDSGK LTLDLVYGLL IEGESLAVHA EKELKIPSQL LRDRSVLYCI CRKPYDNRAM
IACDQCDEWY HFDCIKLHGP PPKTFYCPAC HPNNGGEYIS LPCLAHEEDR STTEAGPHTP
PAERVGAIQC NRSSQWGKAH IRVDLIKLLR CHNETNNSWR ESKRVLHRTA RRRSNFVGLL
//
