ID   A0A0D9WZE4_9ORYZ        Unreviewed;       973 AA.
AC   A0A0D9WZE4;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   03-MAY-2023, entry version 24.
DE   RecName: Full=HRDC domain-containing protein {ECO:0000259|PROSITE:PS50967};
OS   Leersia perrieri.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Leersia.
OX   NCBI_TaxID=77586 {ECO:0000313|EnsemblPlants:LPERR07G13490.4, ECO:0000313|Proteomes:UP000032180};
RN   [1] {ECO:0000313|EnsemblPlants:LPERR07G13490.4, ECO:0000313|Proteomes:UP000032180}
RP   NUCLEOTIDE SEQUENCE.
RA   Wing R.A.;
RT   "Oryza genome evolution.";
RL   Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:LPERR07G13490.4, ECO:0000313|Proteomes:UP000032180}
RP   NUCLEOTIDE SEQUENCE.
RA   Yu Y., Lee S., de Baynast K., Wissotski M., Liu L., Talag J.,
RA   Goicoechea J., Angelova A., Jetty R., Kudrna D., Golser W., Rivera L.,
RA   Zhang J., Wing R.;
RL   Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EnsemblPlants:LPERR07G13490.4}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
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DR   AlphaFoldDB; A0A0D9WZE4; -.
DR   EnsemblPlants; LPERR07G13490.4; LPERR07G13490.4; LPERR07G13490.
DR   Gramene; LPERR07G13490.4; LPERR07G13490.4; LPERR07G13490.
DR   HOGENOM; CLU_006659_0_0_1; -.
DR   Proteomes; UP000032180; Chromosome 7.
DR   GO; GO:0000175; F:3'-5'-RNA exonuclease activity; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR   GO; GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:InterPro.
DR   Gene3D; 1.10.150.80; HRDC domain; 1.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR002562; 3'-5'_exonuclease_dom.
DR   InterPro; IPR010997; HRDC-like_sf.
DR   InterPro; IPR002121; HRDC_dom.
DR   InterPro; IPR044876; HRDC_dom_sf.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR045092; Rrp6-like.
DR   PANTHER; PTHR12124; POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED; 1.
DR   PANTHER; PTHR12124:SF68; PROTEIN RRP6-LIKE 3; 1.
DR   Pfam; PF01612; DNA_pol_A_exo1; 1.
DR   Pfam; PF00570; HRDC; 1.
DR   SMART; SM00474; 35EXOc; 1.
DR   SUPFAM; SSF47819; HRDC-like; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50967; HRDC; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000032180}.
FT   DOMAIN          351..438
FT                   /note="HRDC"
FT                   /evidence="ECO:0000259|PROSITE:PS50967"
FT   REGION          1..55
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          70..97
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          753..875
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          933..973
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        38..55
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        753..769
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        770..787
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        788..846
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        958..973
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   973 AA;  109765 MW;  90906048DAD3D35A CRC64;
     MPATNLRARA AVAAAARRRG REPASPGRLG GLRRGRRRPR RACEEEEKPQ DRFKRVLADN
     SYSRFKHLRR QGAEPVGSCR HSGEAQPPPQ ESSQKVHPLG EEITSVLNNP PDFQNFMPGS
     QCPEMSTSYN WIDTDAQLEN LTRLLDDEKA FAVDTEQHSL RSFLGYTALM QISTQKADYL
     IDTIALHDVM GMLRPIFHGA DNDVLWLQRD FHIYVVNMFD TAKACEVLSK PQKSLAYLLE
     LYCGVTTDKT MQREDWRLRP LTPEMILYAR CDAHYLLYIA NCLALELHAK TYDGSDSPGD
     KVNFFFEASH RSNMVCMQLY AKEIEFPPGA SSAASIFSRN IQSHGLVSSR SSEVKDLVWK
     ICAWRDLMAR MHDESLRYVL SDQAIASLAV NVPRGPTEVC SAISETDMSN STMYPSLPSP
     SPIVVAHIEE LRNLIEDTTV SMEDIFQNML EKYKDPSGLC RLSVYNYNLV SQLCLKQQNI
     FSFASSGEKL LTAPPNKKAS RELFIKKFSC KSPVYHNCRI YASDGRLLCY CDRKKLEWYI
     QRNLAKLIED NPPAIMLLFE PKGRPEDEDN DFYIQSKKNI CVGCGEKSHY IRYRIIPSCY
     RMHFPEHLKS HRSHDIVLLC VDCHEIAHSA AEKYKRQIAK EFGVPLFVQK IVNSGDISLI
     TDASLSDDKS NKTGVSPLQL RTAAMALLRH GSNMPLKRCE ELMQIVKSYY GGRDVTPEDL
     EMALLVGMSP HERRRLTKKK GISYRAQAQN IIRNSKSNNI TNNNGHDSDN GYALHEHFSK
     DGAESNSQPD IDENNNQVDV DDTTSQPDSR NNDQVHDPNM SQESTNCSLS MDDPISVSTM
     ETDPVHQANI GGSPVNGDLD RDPHNIDNSN QTVPQNGDKK ISLLGHGHHG KQIVGLLLSN
     GGEEAINQFC QRWRQVFVES VHPRHLPSGW NIKHSGRRDF GDFSVYKPPK KAPDVEQSET
     LTDSIGQAKG SQK
//