ID   A0A0D9Y3J2_9ORYZ        Unreviewed;       161 AA.
AC   A0A0D9Y3J2;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   27-MAR-2024, entry version 24.
DE   RecName: Full=PHD finger protein ALFIN-LIKE {ECO:0000256|RuleBase:RU369089};
OS   Oryza glumipatula.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=40148 {ECO:0000313|EnsemblPlants:OGLUM01G04170.1};
RN   [1] {ECO:0000313|EnsemblPlants:OGLUM01G04170.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Wing R.A., Panaud O., Oliveira A.C.;
RT   "Oryza genome evolution.";
RL   Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:OGLUM01G04170.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
CC   -!- FUNCTION: Histone-binding component that specifically recognizes H3
CC       tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription
CC       start sites of virtually all active genes.
CC       {ECO:0000256|RuleBase:RU369089}.
CC   -!- SUBUNIT: Interacts with H3K4me3 and to a lesser extent with H3K4me2.
CC       {ECO:0000256|RuleBase:RU369089}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU369089}.
CC   -!- DOMAIN: The PHD-type zinc finger mediates the binding to H3K4me3.
CC       {ECO:0000256|RuleBase:RU369089}.
CC   -!- SIMILARITY: Belongs to the Alfin family.
CC       {ECO:0000256|RuleBase:RU369089}.
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DR   AlphaFoldDB; A0A0D9Y3J2; -.
DR   STRING; 40148.A0A0D9Y3J2; -.
DR   EnsemblPlants; OGLUM01G04170.1; OGLUM01G04170.1; OGLUM01G04170.
DR   Gramene; OGLUM01G04170.1; OGLUM01G04170.1; OGLUM01G04170.
DR   eggNOG; KOG1632; Eukaryota.
DR   HOGENOM; CLU_1799571_0_0_1; -.
DR   Proteomes; UP000026961; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0042393; F:histone binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006325; P:chromatin organization; IEA:UniProtKB-UniRule.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProtKB-UniRule.
DR   InterPro; IPR045104; Alfin.
DR   InterPro; IPR021998; Alfin_N.
DR   PANTHER; PTHR12321; CPG BINDING PROTEIN; 1.
DR   PANTHER; PTHR12321:SF180; PHD FINGER PROTEIN ALFIN-LIKE 9; 1.
DR   Pfam; PF12165; Alfin; 1.
PE   3: Inferred from homology;
KW   Chromatin regulator {ECO:0000256|RuleBase:RU369089};
KW   Metal-binding {ECO:0000256|RuleBase:RU369089};
KW   Nucleus {ECO:0000256|RuleBase:RU369089};
KW   Reference proteome {ECO:0000313|Proteomes:UP000026961};
KW   Transcription {ECO:0000256|RuleBase:RU369089};
KW   Transcription regulation {ECO:0000256|RuleBase:RU369089};
KW   Zinc {ECO:0000256|RuleBase:RU369089};
KW   Zinc-finger {ECO:0000256|RuleBase:RU369089}.
FT   DOMAIN          33..141
FT                   /note="Alfin N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF12165"
SQ   SEQUENCE   161 AA;  17544 MW;  0F33C8A5A7CED6E3 CRC64;
     MAGEEFGLAA AAASAAAADA ASGRSSRVTA LRSVEDIFSD FRARRSAIVR ALTEDLEKFT
     ALCNPDLDCL CLYGNSDGAW EVAPPPEMVP PELPEPALGI NFSRDKMYRS DWVALLSVFS
     DSWLLAVAFF HGARLDRDDR YTAPDSSLLS RSHTMLFPLL I
//