ID   A0A0D9Z492_9ORYZ        Unreviewed;       421 AA.
AC   A0A0D9Z492;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   24-JAN-2024, entry version 28.
DE   RecName: Full=5'-3' exonuclease domain-containing protein {ECO:0000259|SMART:SM00475};
OS   Oryza glumipatula.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=40148 {ECO:0000313|EnsemblPlants:OGLUM03G09280.1};
RN   [1] {ECO:0000313|EnsemblPlants:OGLUM03G09280.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Wing R.A., Panaud O., Oliveira A.C.;
RT   "Oryza genome evolution.";
RL   Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:OGLUM03G09280.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
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DR   AlphaFoldDB; A0A0D9Z492; -.
DR   STRING; 40148.A0A0D9Z492; -.
DR   EnsemblPlants; OGLUM03G09280.1; OGLUM03G09280.1; OGLUM03G09280.
DR   Gramene; OGLUM03G09280.1; OGLUM03G09280.1; OGLUM03G09280.
DR   eggNOG; ENOG502QSF6; Eukaryota.
DR   Proteomes; UP000026961; Unassembled WGS sequence.
DR   GO; GO:0017108; F:5'-flap endonuclease activity; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-EC.
DR   GO; GO:0033567; P:DNA replication, Okazaki fragment processing; IEA:InterPro.
DR   CDD; cd09898; H3TH_53EXO; 1.
DR   CDD; cd09859; PIN_53EXO; 1.
DR   Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR   Gene3D; 3.40.50.1010; 5'-nuclease; 1.
DR   InterPro; IPR020046; 5-3_exonucl_a-hlix_arch_N.
DR   InterPro; IPR002421; 5-3_exonuclease.
DR   InterPro; IPR036279; 5-3_exonuclease_C_sf.
DR   InterPro; IPR020045; DNA_polI_H3TH.
DR   InterPro; IPR038969; FEN.
DR   InterPro; IPR008918; HhH2.
DR   InterPro; IPR029060; PIN-like_dom_sf.
DR   PANTHER; PTHR42646:SF2; DNA-DIRECTED DNA POLYMERASE; 1.
DR   PANTHER; PTHR42646; FLAP ENDONUCLEASE XNI; 1.
DR   Pfam; PF01367; 5_3_exonuc; 1.
DR   Pfam; PF02739; 5_3_exonuc_N; 1.
DR   SMART; SM00475; 53EXOc; 1.
DR   SMART; SM00279; HhH2; 1.
DR   SUPFAM; SSF47807; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR   SUPFAM; SSF88723; PIN domain-like; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000026961}.
FT   DOMAIN          89..380
FT                   /note="5'-3' exonuclease"
FT                   /evidence="ECO:0000259|SMART:SM00475"
SQ   SEQUENCE   421 AA;  46261 MW;  B4CB600E83E0D428 CRC64;
     MACCCLRAST APRFLLFRAA ARRAPLPVAV SRKGFSEQSV LPITDMIENF QGPSMENTPR
     IPLYDDSLPS SLLTTSPNPS DSVAHADPSK SRIMLVDGTS VMYRSYYKIL AQLQHGQLEH
     ADGNGDWVLT IFKALSLVLD MLEFIPSHAA VVFDHDGVPY GHYTAMPSKE CHMAKGMTFR
     HMLYPSYKSN RIPTPDTIVQ GMQYLKASIK AMSIKVIEVP GVEADDVIGT LAVSSVSAGY
     KVRIVSPDKD FFQILSPSLR LLRIAPRGSG MVSFGVEDFV KRYGALKPSQ FVDVVALSGD
     KADNIPGVEG IGDINAVKLI TKFGSLENLL KSVDEVEEER IKQALISQSE QAMLCKSLAT
     LRSDLPSYMV PFKTSDLVFQ KPKDDGAKFI KLLRALEAYA EGSSADLIIR RAAYLWNKLN
     S
//