ID A0A0D9Z790_9ORYZ Unreviewed; 900 AA.
AC A0A0D9Z790;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 35.
DE RecName: Full=MIF4G domain-containing protein {ECO:0000259|SMART:SM00543};
OS Oryza glumipatula.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=40148 {ECO:0000313|EnsemblPlants:OGLUM03G17640.1};
RN [1] {ECO:0000313|EnsemblPlants:OGLUM03G17640.1}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A., Panaud O., Oliveira A.C.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:OGLUM03G17640.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the NCBP1 family.
CC {ECO:0000256|ARBA:ARBA00007413}.
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DR AlphaFoldDB; A0A0D9Z790; -.
DR STRING; 40148.A0A0D9Z790; -.
DR EnsemblPlants; OGLUM03G17640.1; OGLUM03G17640.1; OGLUM03G17640.
DR Gramene; OGLUM03G17640.1; OGLUM03G17640.1; OGLUM03G17640.
DR eggNOG; KOG1104; Eukaryota.
DR HOGENOM; CLU_013207_0_0_1; -.
DR Proteomes; UP000026961; Unassembled WGS sequence.
DR GO; GO:0005845; C:mRNA cap binding complex; IEA:EnsemblPlants.
DR GO; GO:0005846; C:nuclear cap binding complex; IEA:EnsemblPlants.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000339; F:RNA cap binding; IEA:EnsemblPlants.
DR GO; GO:1901527; P:abscisic acid-activated signaling pathway involved in stomatal movement; IEA:EnsemblPlants.
DR GO; GO:0000380; P:alternative mRNA splicing, via spliceosome; IEA:EnsemblPlants.
DR GO; GO:0051607; P:defense response to virus; IEA:EnsemblPlants.
DR GO; GO:0048574; P:long-day photoperiodism, flowering; IEA:EnsemblPlants.
DR GO; GO:0006406; P:mRNA export from nucleus; IEA:InterPro.
DR GO; GO:0031053; P:primary miRNA processing; IEA:EnsemblPlants.
DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants.
DR Gene3D; 1.25.40.180; -; 3.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR027159; CBP80.
DR InterPro; IPR015172; MIF4G-like_typ-1.
DR InterPro; IPR015174; MIF4G-like_typ-2.
DR InterPro; IPR003890; MIF4G-like_typ-3.
DR PANTHER; PTHR12412; CAP BINDING PROTEIN; 1.
DR PANTHER; PTHR12412:SF2; NUCLEAR CAP-BINDING PROTEIN SUBUNIT 1; 1.
DR Pfam; PF02854; MIF4G; 1.
DR Pfam; PF09088; MIF4G_like; 1.
DR Pfam; PF09090; MIF4G_like_2; 1.
DR SMART; SM00543; MIF4G; 1.
DR SUPFAM; SSF48371; ARM repeat; 3.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000026961}.
FT DOMAIN 9..228
FT /note="MIF4G"
FT /evidence="ECO:0000259|SMART:SM00543"
FT REGION 785..830
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 676..710
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 796..830
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 900 AA; 102541 MW; 5F09AB8C6F6716FA CRC64;
MSAGWRTLLL RIGDRCPEYG GSADHKEHIE TCYGVLCREY EHSKDAMFEF LLQCADQLPH
KIPFFGVLIG LINLENEDFA KGIVDTTHAN LQDALHNENR DRIRILLRFL CGLMCSKVVL
PNSIIETFEA LLSSAATILD EETGNPSWQP RADFYVYCIL ASLPWGGSEL FEQVPDEFER
VLVGIQSYIS IRRHFDDIAF SVFETDEGNS PNKKDFIEDL WERIQVLSRN GWKVKSVPKP
HLSFEAQLVA GVSHRFSPIS CPPPTISQSS SEIVKGQEKH EADLKYPQRL RRLHIFPTNK
AEKPYPLAVS RPETLSLLFS RLLCRSSSSS PLLSSALPVL VMVRRARAES RLRRSRRSRR
KECAFYLVSL PVPFRYEYLM AETIFSQLLL LPNPPFRPIY YTLVIIDLCK ALPGAFPSVV
VGAVHALFDR ISNMDMECRT RLILWFSHHL SNFQFIWPWQ EWAYVKDLPK WAPQRVFVQE
VLEREIRLSY FDKIKQSIED AVELEELLPP KAGPNFRYHS DEGKESTDGH RLSKELVAMV
RGRKTQGDII SWVDEKIIPV NGAKFALDVV SQTLLDIGSK SFTHLITVLE RYGQIISKLC
PNEEMQLLLM DEVSAYWKNS TQMIAIAIDR MMGYRLLSNL AIVKWVFSPA NVDQFHVSDR
PWEILRNAVS KTYNRIFDLR KEIQTLRKGL QAAKEASEKA ARELEEAKSI IEIVDGQPVP
SENPGRLRRL QARADKAKEG EVTTEESLEA KEALLARGLE ESKELLRLLF KSFVEVLTER
LPPISADGDV PNLRAGDPNV NSSARDPEAT TMEIDNENGG DNDSQLNGQN KKISHNVGEL
EQWCLCTLGY LKSFSRQYAT EIWSHIAMLD QEIFVGNIHP LIRKAAFSGL CRPTSEGSHL
//
