ID   A0A0D9ZFE7_9ORYZ        Unreviewed;       681 AA.
AC   A0A0D9ZFE7;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   27-MAR-2024, entry version 33.
DE   RecName: Full=Flap endonuclease 1 {ECO:0008006|Google:ProtNLM};
OS   Oryza glumipatula.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=40148 {ECO:0000313|EnsemblPlants:OGLUM03G39870.2};
RN   [1] {ECO:0000313|EnsemblPlants:OGLUM03G39870.2}
RP   NUCLEOTIDE SEQUENCE.
RA   Wing R.A., Panaud O., Oliveira A.C.;
RT   "Oryza genome evolution.";
RL   Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:OGLUM03G39870.2}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
CC   -!- COFACTOR:
CC       Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC         Evidence={ECO:0000256|ARBA:ARBA00001946};
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DR   AlphaFoldDB; A0A0D9ZFE7; -.
DR   EnsemblPlants; OGLUM03G39870.2; OGLUM03G39870.2; OGLUM03G39870.
DR   Gramene; OGLUM03G39870.2; OGLUM03G39870.2; OGLUM03G39870.
DR   Proteomes; UP000026961; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.
DR   GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR   CDD; cd09907; H3TH_FEN1-Euk; 1.
DR   CDD; cd02604; HAD_5NT; 1.
DR   CDD; cd09867; PIN_FEN1; 1.
DR   Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR   Gene3D; 3.40.50.1010; 5'-nuclease; 2.
DR   Gene3D; 3.40.50.1000; HAD superfamily/HAD-like; 1.
DR   InterPro; IPR036279; 5-3_exonuclease_C_sf.
DR   InterPro; IPR036412; HAD-like_sf.
DR   InterPro; IPR006439; HAD-SF_hydro_IA.
DR   InterPro; IPR023214; HAD_sf.
DR   InterPro; IPR008918; HhH2.
DR   InterPro; IPR029060; PIN-like_dom_sf.
DR   InterPro; IPR010237; Pyr-5-nucltdase.
DR   InterPro; IPR006086; XPG-I_dom.
DR   InterPro; IPR006084; XPG/Rad2.
DR   InterPro; IPR019974; XPG_CS.
DR   InterPro; IPR006085; XPG_DNA_repair_N.
DR   NCBIfam; TIGR01509; HAD-SF-IA-v3; 1.
DR   NCBIfam; TIGR01993; Pyr-5-nucltdase; 1.
DR   PANTHER; PTHR12725; HALOACID DEHALOGENASE-LIKE HYDROLASE; 1.
DR   PANTHER; PTHR12725:SF117; HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN; 1.
DR   Pfam; PF00702; Hydrolase; 1.
DR   Pfam; PF00867; XPG_I; 1.
DR   Pfam; PF00752; XPG_N; 1.
DR   PRINTS; PR00853; XPGRADSUPER.
DR   SFLD; SFLDG01132; C1.5.3:_5'-Nucleotidase_Like; 1.
DR   SFLD; SFLDS00003; Haloacid_Dehalogenase; 1.
DR   SMART; SM00279; HhH2; 1.
DR   SMART; SM00484; XPGI; 1.
DR   SMART; SM00485; XPGN; 1.
DR   SUPFAM; SSF47807; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR   SUPFAM; SSF56784; HAD-like; 1.
DR   SUPFAM; SSF88723; PIN domain-like; 1.
DR   PROSITE; PS00842; XPG_2; 1.
PE   4: Predicted;
KW   DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW   DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW   Reference proteome {ECO:0000313|Proteomes:UP000026961}.
FT   DOMAIN          68..179
FT                   /note="XPG N-terminal"
FT                   /evidence="ECO:0000259|SMART:SM00485"
FT   DOMAIN          176..248
FT                   /note="XPG-I"
FT                   /evidence="ECO:0000259|SMART:SM00484"
SQ   SEQUENCE   681 AA;  75863 MW;  5AD021462DFF172D CRC64;
     MAMCRSGRWR PIYSIARKRP KLGTIAHSEV YRYPLRPRVA WPEARERRLL AAPRRRAWSS
     PPPPAVAMGI KGLTKLLAEH APGAAVRRRV EDYRGRVVAI DASLSIYQFL IVVGRKGTEV
     LTNEAGEVTR SLKRDGSSED LNRAIEVGDE DLIEKFSKRT VKVTKKHNED CKRLLSLMGV
     PVVQAPGEAE AQCAALCENH KVFAIASEDM DSLTFGARRF LRHLTDLSFK RSPVTEFEVS
     KVLEELGLTM DQFIDLCILS GCDYCIGGQR ALKLIRQHGC IEEVVQNLSQ TRYSVPEDWP
     YQEVRALFKE PNVCTDIPDF LWTPPDEESV EKIKAANDKF SLGRGKLLAP VANLTGSTST
     AGKEPKCILG GPGQVMKARS PLQVCKSSSL NFIHDNSKAM EAIVEGSKYE CLLFDLDDTL
     YPFSSGINLA CRKNIQDYMR HHLRIEESQI ADMCLELYKE YGTTMAGLKA LGYEFDNDEF
     HANVHGTLPY DNLHFDPVLR TLLLSIPQRK IIFTNSDKAH AEEVLCRVGI QDCFEGIICF
     ETLNPPTPTC HGLHKPLSSI SDELSSDLDD LDESDGFRPK SPILCKPSIE AMEAAFRIAN
     VDPEKTIFFD DSVRNIASGK AAGFHTVIVG RPTLVPGADH ALESIHNIKE ALPEIWDGWS
     ESDVVLASTA SETTISENFE K
//