ID A0A0D9ZGE0_9ORYZ Unreviewed; 845 AA.
AC A0A0D9ZGE0;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE RecName: Full=SWIRM domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Oryza glumipatula.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=40148 {ECO:0000313|EnsemblPlants:OGLUM04G00470.2};
RN [1] {ECO:0000313|EnsemblPlants:OGLUM04G00470.2}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A., Panaud O., Oliveira A.C.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:OGLUM04G00470.2}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
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DR AlphaFoldDB; A0A0D9ZGE0; -.
DR STRING; 40148.A0A0D9ZGE0; -.
DR EnsemblPlants; OGLUM04G00470.2; OGLUM04G00470.2; OGLUM04G00470.
DR Gramene; OGLUM04G00470.2; OGLUM04G00470.2; OGLUM04G00470.
DR eggNOG; KOG1279; Eukaryota.
DR Proteomes; UP000026961; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0051171; P:regulation of nitrogen compound metabolic process; IEA:UniProt.
DR GO; GO:0080090; P:regulation of primary metabolic process; IEA:UniProt.
DR CDD; cd00167; SANT; 1.
DR CDD; cd02336; ZZ_RSC8; 1.
DR Gene3D; 3.30.60.90; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR041984; Rsc8/Ssr1/Ssr2_ZZ.
DR InterPro; IPR001005; SANT/Myb.
DR InterPro; IPR017884; SANT_dom.
DR InterPro; IPR032451; SMARCC_C.
DR InterPro; IPR007526; SWIRM.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR000433; Znf_ZZ.
DR InterPro; IPR043145; Znf_ZZ_sf.
DR PANTHER; PTHR12802; SWI/SNF COMPLEX-RELATED; 1.
DR PANTHER; PTHR12802:SF179; SWI_SNF COMPLEX SUBUNIT SWI3D; 1.
DR Pfam; PF00249; Myb_DNA-binding; 1.
DR Pfam; PF04433; SWIRM; 1.
DR Pfam; PF16495; SWIRM-assoc_1; 1.
DR SMART; SM00717; SANT; 1.
DR SMART; SM00291; ZnF_ZZ; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50090; MYB_LIKE; 1.
DR PROSITE; PS51293; SANT; 1.
DR PROSITE; PS50934; SWIRM; 1.
DR PROSITE; PS01357; ZF_ZZ_1; 1.
DR PROSITE; PS50135; ZF_ZZ_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000026961};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00228}.
FT DOMAIN 93..190
FT /note="SWIRM"
FT /evidence="ECO:0000259|PROSITE:PS50934"
FT DOMAIN 258..315
FT /note="ZZ-type"
FT /evidence="ECO:0000259|PROSITE:PS50135"
FT DOMAIN 316..366
FT /note="SANT"
FT /evidence="ECO:0000259|PROSITE:PS51293"
FT DOMAIN 319..362
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT REGION 1..82
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 376..472
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 558..705
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 818..845
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 36..82
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 376..392
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 393..418
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 424..458
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 570..596
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 597..614
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 628..684
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 685..705
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 845 AA; 92255 MW; F757072CCD75D6D1 CRC64;
MEPKPSPPPA AAAAATATAT YRRRGKPKPK PKRKAAKPPS PSPPPKRQQA RDDPPPPPPH
SPLNPAPEDA PPQLDPPPPA LIEKAKLPPV REEVEAVLSR GAGVHEIHQI EKQALPSFFD
GISLRRTPEI YLGIRNFIMK KFHSNPQMHL ELKDLSELSD GEMDAQLKVL SFLSHWGLIN
FHPFPPAVQG VSELFESITS ADTEEKISVV EKLFQFETVQ SYLIPAPDQA EVTAPIHTPS
LLSEPTLAED SITQAESSVE YHCNSCSVDC SRKRYHCRTQ ADFDLCCDCY DKGNLDAGMS
QTDFIIMESA EIPGFGGTSW TDQETLLLLE ALEIFQANWG DIAEHVATKT KAQCMLHFLQ
MPIMDSFLHD GDVNETSQEA AEQVSAEQGT SRVTEKMEVE DKAEEIKTND RKSAAKPKLN
LTETEVNLDD NAANNDTKSS GDINVDVCSN TGVSNRSSDT EPTKKETSGE NTSNIVNDVL
KYAFEAVGHI PKIEDLGSFT EAGDPVMALA AFLSGLVDHD DVATLCCSSL KAISDMSPAL
QLATMHCFIL QDPPNDLKDP PVSISFANTD GGRKDKDASS NPSVTDKNDN LKEESALSVE
EPNTTSTSSK NTRKLSNAKE SKDESPQVEP KPSSANDCDN PISQVAKSAP DNIRGHSSTS
LPVSLNNTNE PCSISSQEAS AGSTKDTSHT KRIEGDEPIY EDPPLEGKVE LKKGYIQDHN
SIKKIVADDV SIQRLQRAAA SAISAAAVKA KLLAKHEEYQ IQRLAALVID KQLHKMQAKM
SVFTEADNLV LRAREHTERT RKKLLMERSA IITSRMAALP PRPNHQPGMP GSRLPVGYGV
NQHLR
//
