ID A0A0D9ZK61_9ORYZ Unreviewed; 1069 AA.
AC A0A0D9ZK61;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 34.
DE RecName: Full=Clp R domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Oryza glumipatula.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=40148 {ECO:0000313|EnsemblPlants:OGLUM04G10700.1};
RN [1] {ECO:0000313|EnsemblPlants:OGLUM04G10700.1}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A., Panaud O., Oliveira A.C.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:OGLUM04G10700.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|RuleBase:RU004432}.
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DR AlphaFoldDB; A0A0D9ZK61; -.
DR STRING; 40148.A0A0D9ZK61; -.
DR EnsemblPlants; OGLUM04G10700.1; OGLUM04G10700.1; OGLUM04G10700.
DR Gramene; OGLUM04G10700.1; OGLUM04G10700.1; OGLUM04G10700.
DR eggNOG; KOG0048; Eukaryota.
DR eggNOG; KOG1051; Eukaryota.
DR HOGENOM; CLU_005070_4_1_1; -.
DR Proteomes; UP000026961; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 2.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 4.10.860.10; UVR domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR017930; Myb_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR001943; UVR_dom.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF155; CLP PROTEASE ATP-BINDING SUBUNIT; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
DR PROSITE; PS51294; HTH_MYB; 1.
DR PROSITE; PS50151; UVR; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432};
KW Reference proteome {ECO:0000313|Proteomes:UP000026961};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 5..32
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT DOMAIN 239..381
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT DOMAIN 656..691
FT /note="UVR"
FT /evidence="ECO:0000259|PROSITE:PS50151"
SQ SEQUENCE 1069 AA; 117660 MW; AD6F53BEAA40B166 CRC64;
MNYLSPDLKR GNFTDDDDEL TIKLHTLLGN KWNTHIKRKL MSQGIDPQTH QPVSAGTSVA
VASELTTTAI TVGFPSLAVA PARGSSRRKE GRLGGVFLVV VAGGGGVSGG GQVSDGGELE
LRVEERREVV VAARRRRGGQ RLGGGAYGRG DWIGGQVARG FPFGVGRRSG TARFRVRARA
TMMRTMPTRT LTLGGFQGLR QTNFLDSRSV IKRDFGSIVA SQISRPRGLG SRGVVRAMFE
RFTEKAIKVI MLAQEEARRL GHNFVGTEQI LLGLIGEGTG IAAKVLKSMG INLKDARVEV
EKIIGRGSGF VAVEIPFTPR AKRVLELSLE EARQLGHNYI GSEHLLLGLL REGEGVAARV
LESLGADPNN IRTQVIRMVG ESTEAVGAGV GGGSSGQKMP TLEEYGTNLT KLAEEGKLDP
VVGRQDQIER VTQILGRRTK NNPCLIGEPG VGKTAIAEGL AQRISNGDVP ETIEGKKVIT
LDMGLLVAGT KYRGEFEERL KKLMEEIKQN DDIILFIDEV HTLIGAGAAE GAIDAANILK
PALARGELQC IGATTLDEYR KHIEKDPALE RRFQPVKVPE PTVDETIQIL RGLRERYELH
HKLRYTDDSL IAAAQLSYQY ISDRFLPDKA IDLIDEAGSR VRLRHAQLPD EAKELDKELR
QVTKDKNEAV RGQDFEKAGE LRDREMELKA QITAIIDKSK EMVKAETESG EVGPLVTEAD
IQHIVSSWTG IPVEKVSSDE SDRLLKMEET LHTRIIGQDE AVKAISRAIR RARVGLKNPN
RPIASFIFSG PTGVGKSELA KALAAYYFGS EEAMIRLDMS EFMERHTVSK LIGSPPGYVG
YTEGGQLTEA VRRRPYTVVL FDEIEKAHPD VFNMMLQILE DGRLTDSKGR TVDFKNTLLI
MTSNVGSSVI EKGGRKIGFD LDYDEKDTSY NRIKSLVTEE LKQYFRPEFL NRLDEMIVFR
QLTKLEVKEI ADIMLKEVFD RLKAKDIDLQ VTEKFRDRVV DEGYNPSYGA RPLRRAIMRL
LEDSLAEKML AGEVKEGDSA IVDVDSEGKV IVLNGGSGVP EPLAPALSV
//