ID A0A0D9ZWZ7_9ORYZ Unreviewed; 954 AA.
AC A0A0D9ZWZ7;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE RecName: Full=JmjC domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Oryza glumipatula.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=40148 {ECO:0000313|EnsemblPlants:OGLUM05G11100.1};
RN [1] {ECO:0000313|EnsemblPlants:OGLUM05G11100.1}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A., Panaud O., Oliveira A.C.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:OGLUM05G11100.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR AlphaFoldDB; A0A0D9ZWZ7; -.
DR STRING; 40148.A0A0D9ZWZ7; -.
DR EnsemblPlants; OGLUM05G11100.1; OGLUM05G11100.1; OGLUM05G11100.
DR Gramene; OGLUM05G11100.1; OGLUM05G11100.1; OGLUM05G11100.
DR eggNOG; KOG1246; Eukaryota.
DR HOGENOM; CLU_000991_8_1_1; -.
DR Proteomes; UP000026961; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0032453; F:histone H3K4 demethylase activity; IEA:UniProt.
DR GO; GO:0010468; P:regulation of gene expression; IEA:UniProt.
DR Gene3D; 3.30.160.360; -; 1.
DR Gene3D; 2.60.120.650; Cupin; 1.
DR InterPro; IPR003889; FYrich_C.
DR InterPro; IPR003888; FYrich_N.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR003349; JmjN.
DR InterPro; IPR004198; Znf_C5HC2.
DR PANTHER; PTHR10694; LYSINE-SPECIFIC DEMETHYLASE; 1.
DR PANTHER; PTHR10694:SF140; OS05G0302300 PROTEIN; 1.
DR Pfam; PF05965; FYRC; 1.
DR Pfam; PF05964; FYRN; 1.
DR Pfam; PF02373; JmjC; 1.
DR Pfam; PF02375; JmjN; 1.
DR Pfam; PF02928; zf-C5HC2; 1.
DR SMART; SM00542; FYRC; 1.
DR SMART; SM00541; FYRN; 1.
DR SMART; SM00558; JmjC; 1.
DR SMART; SM00545; JmjN; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR PROSITE; PS51543; FYRC; 1.
DR PROSITE; PS51542; FYRN; 1.
DR PROSITE; PS51184; JMJC; 1.
DR PROSITE; PS51183; JMJN; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000026961};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 59..100
FT /note="JmjN"
FT /evidence="ECO:0000259|PROSITE:PS51183"
FT DOMAIN 268..434
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
FT REGION 1..65
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 122..148
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 134..148
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 954 AA; 107102 MW; B0902C0F2251C9C0 CRC64;
MVSSRDPGEE VSAPPPPPPR RGEKRRMRGR TPSPEPASAP QTNGKWHPHE SYRPEIDDAP
VFTPTEEEFK DPIRYITSIR PQAEKYGICR IVPPSSWRPP CSLKEKNFWE CTEFNTRVQQ
VDKLQNREPT KKKSQPRVQK KRKRRKRLRF GMTHRRPSAN TSEDCADADE KFGFQSGSDF
TLDEFQKYAD EFKQQYFGIK GSDEIPLSEI KKKKKNWQPS VDEIEGEYWR IVVCPTDEVE
VDYGADLDTS MFSSGFSKLS SDSNRRDPYG LSCWNLNNLP RIPGSVLSFE TEDISGVVVP
WLYVGMCFSS FCWHVEDHFL YSMNYMHFGE PKVWYGVPGA DAVKLEEAMR KNLPRLFEEQ
PDLLHELVTQ LSPSVLKSEG VPVYRVVQNP GEFVLTLPRA YHSGFNCGFN CAEAVNVAPV
DWLPHGQCAV ELYRKQRRKT SISHDKLLLK TANEAVRQLW MNLSDCKSEQ GVYRWQDTCG
KDGMLTSAIK TRVKMEKAAR GGNMALRYKK MDGDYDSADR ECFSCFYDLH LSAVSCQCSP
NRFACLNHAN LLCSCEMDRK TALLRYTIEE LHTLVAALEG DPTAVYQWGQ NDLGLVCPSG
STQYKKMDLG ENTEFPDSAT NVNHGCSLGS QDQYHYDPAK PAGYQQEKGI QIASEKHDKN
KMVVNLESPA TASNPSRSKS DCSGSLSLNL SSELPSSRIQ TGNSTLASIT TEKLFGVDIK
SNLAQSSDGQ VSQLAKPSSS QTDEVSKPAI AKYTVELLDS GTMMIGKKWC NQQAIFPKGF
KSRVTFHSVL DPTRTCCYIS EVLDAGLLGP LFRVTVEGLP EVSFTHTSPM QCWDSVRDRV
NEEIAKQISF GKSGLPDFLS CNSLNGLEMF GFLSSPIIKE IEALDPCHQC LDYWLSRVSS
VGTELPSESV MAAMVNDSTN PPIKLLGIEI TRKESEQSSS FNNSCVRRSH LAGC
//