ID A0A0E0B4A3_9ORYZ Unreviewed; 1096 AA.
AC A0A0E0B4A3;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 43.
DE RecName: Full=BHLH domain-containing protein {ECO:0000259|PROSITE:PS50888};
OS Oryza glumipatula.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=40148 {ECO:0000313|EnsemblPlants:OGLUM09G14350.4};
RN [1] {ECO:0000313|EnsemblPlants:OGLUM09G14350.4}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A., Panaud O., Oliveira A.C.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:OGLUM09G14350.4}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the bHLH protein family.
CC {ECO:0000256|ARBA:ARBA00005510}.
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DR AlphaFoldDB; A0A0E0B4A3; -.
DR STRING; 40148.A0A0E0B4A3; -.
DR EnsemblPlants; OGLUM09G14350.4; OGLUM09G14350.4; OGLUM09G14350.
DR Gramene; OGLUM09G14350.4; OGLUM09G14350.4; OGLUM09G14350.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_009750_0_0_1; -.
DR Proteomes; UP000026961; Unassembled WGS sequence.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR CDD; cd18919; bHLH_AtBPE_like; 1.
DR Gene3D; 4.10.280.10; Helix-loop-helix DNA-binding domain; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR046960; PPR_At4g14850-like_plant.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF00010; HLH; 1.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 2.
DR SMART; SM00353; HLH; 1.
DR SUPFAM; SSF47459; HLH, helix-loop-helix DNA-binding domain; 1.
DR PROSITE; PS50888; BHLH; 1.
DR PROSITE; PS51375; PPR; 4.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000026961};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 143..173
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 174..204
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 277..311
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 348..378
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 922..972
FT /note="BHLH"
FT /evidence="ECO:0000259|PROSITE:PS50888"
FT REGION 16..46
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 661..691
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 819..912
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 675..691
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 845..859
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 860..875
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1096 AA; 118226 MW; ACFC0AE09C77BE81 CRC64;
MPPPTVPFFL TSTTLAAAAA KPQRPGPPSP PAQQQQPREA RDGSRDACAS YTARMRLNPQ
LALRLFDHLL RSGADPDHVA YALALGRCAR GRDRRAAAQL HAHAAKRGAA SHRRVCNGLI
HAYAVCGSLL DARKVFDRGH EGDAVAWNSL LRGYAAAGDV NALREFFVGM QARDTVSWNT
IIAWCVENGE YEEAIAVFRE MLASMECLPD RVTLVSVISA ITYLGALAQG LWAHAYVCRK
GIEVEERLSS ALINMYSKCG CIEGAVHVFE NLGAQMNVDT WNAMLAGFTA NGCSEKALEL
FARMEITGLV PNKITFNTVL NACSHGGFVE EGMGCFEIMT KVYGIEPDIA HYGCMVDLFC
RAGLFDKAEK MIQMMPMKPD AAVWKALVGA CKTHRNFELG RKAGHMLIEA APNDHAGYVL
LSNIYALDGN WTGVHKVRKL MLDRGVQKVP GSSSIEIDGV IHEFISGDKS HSSKEDIYEM
LSEMCQQLKV AGYVPDTSHV LLDIDDEDVK ESSLALHSEK LAIAFGLIST APGTPIRIAK
NLRVCGDCHN AVKLLSKIYG RCIIVRDANR FHHFREGSCS CGDFWNPLLL LAPDGPLPTG
AGRSTGKCLV SRPASAAVHN TGKRRACPVF SKGATNEKKR RAGRDRRQAL LKERKLGIRS
LEPRLGDSMD MSESSEKGME SNASSGPGNG IPVEWQSQFS SAFACQPSVA AQHQQHAMMD
SFAAASAGLW ASSDVVSAMS SAAPPRGAGF LAPVPGFLQQ GLGHFPVDSG FIERAARSTC
FGGGMMAGGP YGAADQAMGD AFGGTAEGLM DHHRNVGNDK AEEFAGNGHD EVPSSEVAGG
DCFSKGSDSK KRRRPNEVMG TDQVHSSNLP SDSANESVHS KDKGEESSPA TTNGGKSKGK
GAKETSESQK EEYIHVRARR GQATNSHSLA ERLRREKISE RMKLLQDLVP GCSKVTGKAV
MLDEIINYVQ SLQRQVEFLS MKLATVNPRL DLNIEGLLSK DLLRFPGVPS SSIGFSPEMM
HPQLQLSQPG LIHGGTAGMA NPDVFRRIIQ AQLGAKDGSQ MPHSLNGSFS DVSQMAYPSL
GSQDLSIRPS QDGFQM
//