ID A0A0E0BFF9_9ORYZ Unreviewed; 1348 AA.
AC A0A0E0BFF9;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE RecName: Full=signal-recognition-particle GTPase {ECO:0000256|ARBA:ARBA00035672};
DE EC=3.6.5.4 {ECO:0000256|ARBA:ARBA00035672};
OS Oryza glumipatula.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=40148 {ECO:0000313|EnsemblPlants:OGLUM11G03120.2};
RN [1] {ECO:0000313|EnsemblPlants:OGLUM11G03120.2}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A., Panaud O., Oliveira A.C.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:OGLUM11G03120.2}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=GTP + H2O = GDP + H(+) + phosphate; Xref=Rhea:RHEA:19669,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:37565,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:58189; EC=3.6.5.4;
CC Evidence={ECO:0000256|ARBA:ARBA00035589};
CC PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:19670;
CC Evidence={ECO:0000256|ARBA:ARBA00035589};
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- SIMILARITY: Belongs to the GTP-binding SRP family. SRP54 subfamily.
CC {ECO:0000256|ARBA:ARBA00005450}.
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eS25 family.
CC {ECO:0000256|ARBA:ARBA00009106}.
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DR STRING; 40148.A0A0E0BFF9; -.
DR EnsemblPlants; OGLUM11G03120.2; OGLUM11G03120.2; OGLUM11G03120.
DR Gramene; OGLUM11G03120.2; OGLUM11G03120.2; OGLUM11G03120.
DR eggNOG; KOG0780; Eukaryota.
DR eggNOG; KOG1767; Eukaryota.
DR Proteomes; UP000026961; Unassembled WGS sequence.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0005786; C:signal recognition particle, endoplasmic reticulum targeting; IEA:UniProtKB-KW.
DR GO; GO:0008312; F:7S RNA binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR GO; GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro.
DR CDD; cd18539; SRP_G; 2.
DR Gene3D; 3.30.63.20; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 1.20.120.140; Signal recognition particle SRP54, nucleotide-binding domain; 2.
DR Gene3D; 1.10.260.30; Signal recognition particle, SRP54 subunit, M-domain; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR HAMAP; MF_00306; SRP54; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR004977; Ribosomal_eS25.
DR InterPro; IPR036891; Signal_recog_part_SRP54_M_sf.
DR InterPro; IPR013822; Signal_recog_particl_SRP54_hlx.
DR InterPro; IPR004125; Signal_recog_particle_SRP54_M.
DR InterPro; IPR004780; SRP.
DR InterPro; IPR036225; SRP/SRP_N.
DR InterPro; IPR022941; SRP54.
DR InterPro; IPR000897; SRP54_GTPase_dom.
DR InterPro; IPR042101; SRP54_N_sf.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR00959; ffh; 1.
DR PANTHER; PTHR11564:SF40; SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN CHLOROPLASTIC; 1.
DR PANTHER; PTHR11564; SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54; 1.
DR Pfam; PF03297; Ribosomal_S25; 2.
DR Pfam; PF00448; SRP54; 3.
DR Pfam; PF02881; SRP54_N; 2.
DR Pfam; PF02978; SRP_SPB; 2.
DR SMART; SM00382; AAA; 2.
DR SMART; SM00962; SRP54; 2.
DR SMART; SM00963; SRP54_N; 2.
DR SUPFAM; SSF47364; Domain of the SRP/SRP receptor G-proteins; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR SUPFAM; SSF47446; Signal peptide-binding domain; 2.
DR PROSITE; PS00300; SRP54; 2.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW GTP-binding {ECO:0000256|ARBA:ARBA00023134};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000026961};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Signal recognition particle {ECO:0000256|ARBA:ARBA00023135}.
FT DOMAIN 338..351
FT /note="SRP54-type proteins GTP-binding"
FT /evidence="ECO:0000259|PROSITE:PS00300"
FT DOMAIN 896..909
FT /note="SRP54-type proteins GTP-binding"
FT /evidence="ECO:0000259|PROSITE:PS00300"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1080..1173
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..16
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1116..1146
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1348 AA; 148114 MW; 026D8A66AF76A13C CRC64;
MEATALTLSS RPAAASRSPA KGTFASLHPR RRFSAHAVHL RAAQSASLRA PSPGARRRRR
RGSGLVVRAE MFGQLTTGLE SAWNKLRGVD VLTKENIVEP MRDIRRALLE ADVSLPVVRR
FVSSISEKAL GSDLIRGVRP EQQLVKIVHD ELVQLMGGEV SDLVFAKSGP TVILLAGLQG
VGKTTVCAKL AFYLKKLGKS CMLVAADVYR PAAIDQLTIL GEQVGVPVYS EGTEAKPAQI
TKNAVEEAKR KNIDAIVMDT AGRLQIDKSM MVELKEVKKA VNPTEVLLVV DAMTGQEAAA
LVTTFNIEIG ITGAILTKLD GDSRGGAALS VKEVSGKPIK FVGRGERMED LELFYPDRMA
QRVLGMGDVL SFVEKAQEVM RQEDAVELQK KIMSAKFDFN DFLKQSQNVA KMGSMSRVVG
MIPGMNKVTP AQIREAEKRL AFVESMINAM TAEEREKPEL LAESRDRRIR VAEESGKSEQ
EVSQLVAQLF QMRAQMQKLM GVMTGQEALP GMGNLMESLN ADEKATSSTT LALSSPPTAA
ARRSPAKAIV ASHHLRHSSV PALHLRAVPG PSFRALPSPG FPGWRRKRGS GLVVRAEMFG
QLTTGLESAW NKLRGTDQLT KDNIAEPMRD IRRALLEADV SLPVVRSFIE SVTEKAVGTD
VIRGVKPEQQ LVKLMGGEVS DLVFAKTAPT VILLAGLQGV GKTTVCAKLA YYLKKMVPSL
VLYFKHTLRF LDYRMLIDQS QGKSCMLIAA DVYRPAAIDQ LTILGKQVGV PVYSEGTEAK
PSQIAKNGIK EAKSKKTDVI IVDTAGRLQV DKAMMSELKE VKRAVNPTEV LLVVDAMTGQ
EAAFALRLTR ISFLIWPALV STFNVEIGIT GAILTKLDGD SRGGAALSIK EVSGKPIKFV
GRGERMEDLE PFYPDRMAQR ILGMGDVLSF VEKAQEVMRQ EDAEELQKKI LSAKFNFNDF
LKQTQAIAQM GSFSRIIGMI PGMNKVTPAQ IREAEKNLKF MESMINVMTP EERERPELLA
ESRERRIRVA KESGKNERQV SQLVAQLFRM RAQMQKMMGA MQGQDTPDME GLMDSIKAEE
QAAAGTGKRR RKYGNLRRRD LDAMRDVLGS RPKRLTTCLP PPPPPLRRNP KPARPPPMAP
KKDKAPPPSS KPAKSGAGKQ KKKKWSKGKQ KEKVNNSVLF DKATYDKLLS EVPKYKQITP
SVLSERLRVT RRKNTMTTMT ASIVSRQCGC GFYDGPAAMK PRIVLVTLLT CYGFTNGDCY
RLLFARVAHS HNSSASLSIS IASHVLVMKP SSLANPLGHH RFFSQRRSRP SINGSLARQA
IKDLESRGAI RVVSVHSSQL IYTRATNA
//
