GenomeNet

Database: UniProt
Entry: A0A0E0D4L3_9ORYZ
LinkDB: A0A0E0D4L3_9ORYZ
Original site: A0A0E0D4L3_9ORYZ 
ID   A0A0E0D4L3_9ORYZ        Unreviewed;       332 AA.
AC   A0A0E0D4L3;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   24-JAN-2024, entry version 31.
DE   RecName: Full=CCHC-type domain-containing protein {ECO:0008006|Google:ProtNLM};
OS   Oryza meridionalis.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=40149 {ECO:0000313|EnsemblPlants:OMERI03G26040.1};
RN   [1] {ECO:0000313|EnsemblPlants:OMERI03G26040.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=OR44 {ECO:0000313|EnsemblPlants:OMERI03G26040.1};
RA   Wing R.A., Panaud O., Henry R.;
RL   Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:OMERI03G26040.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   AlphaFoldDB; A0A0E0D4L3; -.
DR   STRING; 40149.A0A0E0D4L3; -.
DR   EnsemblPlants; OMERI03G26040.1; OMERI03G26040.1; OMERI03G26040.
DR   Gramene; OMERI03G26040.1; OMERI03G26040.1; OMERI03G26040.
DR   Proteomes; UP000008021; Chromosome 3.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   Gene3D; 3.30.70.330; -; 1.
DR   Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR035979; RBD_domain_sf.
DR   InterPro; IPR000504; RRM_dom.
DR   InterPro; IPR001878; Znf_CCHC.
DR   InterPro; IPR036875; Znf_CCHC_sf.
DR   PANTHER; PTHR48031:SF2; RNA-BINDING PROTEIN 4; 1.
DR   PANTHER; PTHR48031; SRA STEM-LOOP-INTERACTING RNA-BINDING PROTEIN, MITOCHONDRIAL; 1.
DR   Pfam; PF00076; RRM_1; 2.
DR   Pfam; PF00098; zf-CCHC; 1.
DR   SMART; SM00360; RRM; 1.
DR   SMART; SM00343; ZnF_C2HC; 1.
DR   SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR   SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR   PROSITE; PS50102; RRM; 1.
DR   PROSITE; PS50158; ZF_CCHC; 1.
PE   4: Predicted;
KW   Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008021};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT   DOMAIN          7..109
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   DOMAIN          140..155
FT                   /note="CCHC-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50158"
FT   REGION          110..138
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          157..332
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        110..126
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        179..219
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        240..258
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        312..332
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   332 AA;  36826 MW;  9D8722AD9E35969F CRC64;
     MAGKEEGRIF VGGLSFHTDE RKLADAFRRF GKVVDAQVPY RIDRSSRSSV LRRMVGCRVV
     EIMLERHTQR HRGFGFVTFS DPEAVDSAIK EMHCQELDGR TISVNKAEPK MNTDDTRYES
     GGGRGEYRGG RGDGPPPGNC FECGRAGHWA RDCPNPGGGR SARYSSSKFS AGGRGDRFSG
     SDRFGDRYVD DRYDGGYREP VDVRDRYGGG RDRYANDRYP SGGDRYVPDR YGGPDRYQPS
     SYGRERERSY ERDGVRGNGG YDRSGPRGGG SYDRDGPRGG MSGGYDRDGP RGGGVDRYGG
     GGPARYDGGS YRDRSGPYDR PSRGGRFDDR FQ
//
DBGET integrated database retrieval system