ID A0A0E0D8Q7_9ORYZ Unreviewed; 583 AA.
AC A0A0E0D8Q7;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE RecName: Full=TFIIS central domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Oryza meridionalis.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=40149 {ECO:0000313|EnsemblPlants:OMERI03G35640.4};
RN [1] {ECO:0000313|EnsemblPlants:OMERI03G35640.4}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=OR44 {ECO:0000313|EnsemblPlants:OMERI03G35640.4};
RA Wing R.A., Panaud O., Henry R.;
RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:OMERI03G35640.4}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
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DR AlphaFoldDB; A0A0E0D8Q7; -.
DR EnsemblPlants; OMERI03G35640.4; OMERI03G35640.4; OMERI03G35640.
DR Gramene; OMERI03G35640.4; OMERI03G35640.4; OMERI03G35640.
DR HOGENOM; CLU_420590_0_0_1; -.
DR Proteomes; UP000008021; Chromosome 3.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006368; P:transcription elongation by RNA polymerase II; IEA:InterPro.
DR CDD; cd13749; Zn-ribbon_TFIIS; 1.
DR Gene3D; 2.20.25.10; -; 1.
DR Gene3D; 1.20.930.10; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR Gene3D; 1.10.472.30; Transcription elongation factor S-II, central domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR035441; TFIIS/LEDGF_dom_sf.
DR InterPro; IPR003618; TFIIS_cen_dom.
DR InterPro; IPR036575; TFIIS_cen_dom_sf.
DR InterPro; IPR017923; TFIIS_N.
DR InterPro; IPR006289; TFSII.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR001222; Znf_TFIIS.
DR NCBIfam; TIGR01385; TFSII; 1.
DR PANTHER; PTHR33644:SF5; U-BOX DOMAIN-CONTAINING PROTEIN 62; 1.
DR PANTHER; PTHR33644; U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED; 1.
DR Pfam; PF08711; Med26; 1.
DR Pfam; PF01096; TFIIS_C; 1.
DR Pfam; PF07500; TFIIS_M; 1.
DR SMART; SM00510; TFS2M; 1.
DR SMART; SM00440; ZnF_C2C2; 1.
DR SUPFAM; SSF47676; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR SUPFAM; SSF46942; Elongation factor TFIIS domain 2; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR SUPFAM; SSF57783; Zinc beta-ribbon; 1.
DR PROSITE; PS51321; TFIIS_CENTRAL; 1.
DR PROSITE; PS00466; ZF_TFIIS_1; 1.
DR PROSITE; PS51133; ZF_TFIIS_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000008021};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00472}.
FT DOMAIN 408..538
FT /note="TFIIS central"
FT /evidence="ECO:0000259|PROSITE:PS51321"
FT DOMAIN 541..581
FT /note="TFIIS-type"
FT /evidence="ECO:0000259|PROSITE:PS51133"
FT REGION 1..63
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 307..401
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 16..39
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 335..360
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 370..384
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 583 AA; 65205 MW; F2B910BA59234EB6 CRC64;
MGGHQPHPGG ADSDGDNAVE EVDEGDDDED EEEEEAELAD GAPCSSQQRC ASTPGIGRAG
MNRGNGMRQI EEEQQWQNSH IYNCGNEQYE HASSREDEPS NIPREMRVEN GYGVIGRREG
GPASSYWDLL RAHLSDPLTG ILMDDAMILS CGHSYGSNGM QHIYRMKACG KCGQPITEDS
IRPNFSLRLA VQAFKREEES AKSLKRRRER LEQGNKRTPE RFVGRVAVVT AQCLNGWYVV
KTLDNAESVK LQYRSLAKFT DGGQSSAMVG KRLRYLTKHP HSDIQSMATD LLGYWKKVVI
EEGKKNGTAE NVGSTNSAAR AEKAQPMKVD KSSASGSVKP EKREVNVRGQ KPESIKVEKI
TNNDSKNQQV KVERAPKEAT RTPDTKKPSS VPNGPPKLTS LVKCNDPTRD KIRELLADAF
SRVHGETSKD DREEVRNILD EVDARDPFRV AVTVESALFE RLGRSTGAHK AKYRSIMFNL
RADNNTDFRR RVLLGQVRPE RLVDISPEEM ASDARKLENK QIKEKALFDC ERGGAPKATT
DQFKCGRCGQ RKTTYYQLQT RSADEPMTTF VTCVNCNNHW KFC
//
