GenomeNet

Database: UniProt
Entry: A0A0E0FEF5_9ORYZ
LinkDB: A0A0E0FEF5_9ORYZ
Original site: A0A0E0FEF5_9ORYZ 
ID   A0A0E0FEF5_9ORYZ        Unreviewed;       218 AA.
AC   A0A0E0FEF5;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   24-JAN-2024, entry version 27.
DE   RecName: Full=Nuclear transcription factor Y subunit {ECO:0000256|RuleBase:RU367155};
OS   Oryza meridionalis.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=40149 {ECO:0000313|EnsemblPlants:OMERI12G14030.1};
RN   [1] {ECO:0000313|EnsemblPlants:OMERI12G14030.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=OR44 {ECO:0000313|EnsemblPlants:OMERI12G14030.1};
RA   Wing R.A., Panaud O., Henry R.;
RL   Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:OMERI12G14030.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
CC   -!- FUNCTION: Component of the sequence-specific heterotrimeric
CC       transcription factor (NF-Y) which specifically recognizes a 5'-CCAAT-3'
CC       box motif found in the promoters of its target genes.
CC       {ECO:0000256|RuleBase:RU367155}.
CC   -!- SUBUNIT: Heterotrimeric transcription factor composed of three
CC       components, NF-YA, NF-YB and NF-YC. NF-YB and NF-YC must interact and
CC       dimerize for NF-YA association and DNA binding.
CC       {ECO:0000256|ARBA:ARBA00025911}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC       ECO:0000256|RuleBase:RU367155}.
CC   -!- SIMILARITY: Belongs to the NFYA/HAP2 subunit family.
CC       {ECO:0000256|RuleBase:RU367155}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   AlphaFoldDB; A0A0E0FEF5; -.
DR   STRING; 40149.A0A0E0FEF5; -.
DR   EnsemblPlants; OMERI12G14030.1; OMERI12G14030.1; OMERI12G14030.
DR   Gramene; OMERI12G14030.1; OMERI12G14030.1; OMERI12G14030.
DR   eggNOG; KOG1561; Eukaryota.
DR   HOGENOM; CLU_065504_1_0_1; -.
DR   Proteomes; UP000008021; Chromosome 12.
DR   GO; GO:0016602; C:CCAAT-binding factor complex; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:UniProtKB-UniRule.
DR   Gene3D; 6.10.250.2430; -; 1.
DR   InterPro; IPR018362; CCAAT-binding_factor_CS.
DR   InterPro; IPR001289; NFYA.
DR   PANTHER; PTHR12632:SF93; NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT; 1.
DR   PANTHER; PTHR12632; TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED; 1.
DR   Pfam; PF02045; CBFB_NFYA; 1.
DR   PRINTS; PR00616; CCAATSUBUNTB.
DR   SMART; SM00521; CBF; 1.
DR   PROSITE; PS00686; NFYA_HAP2_1; 1.
DR   PROSITE; PS51152; NFYA_HAP2_2; 1.
PE   3: Inferred from homology;
KW   Activator {ECO:0000256|ARBA:ARBA00023159};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|RuleBase:RU367155};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU367155};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008021};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163,
KW   ECO:0000256|RuleBase:RU367155};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015,
KW   ECO:0000256|RuleBase:RU367155}.
FT   REGION          1..49
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          125..218
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        10..26
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        27..48
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        126..142
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        143..158
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        166..189
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        191..218
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   218 AA;  23849 MW;  695932BA6194D71A CRC64;
     MTSVVHDVSG NHGADERQKQ QRQGEPEDQQ EASVTSTDSH TMVATPSTDY ATPYAHHDMA
     HAMQGQIAYA NIDPYYGSLY AAYGGQPMMH PPLVGMHPAG LPLPTDAIEE PVYVNAKQYN
     AILRRRQSRA KAESEKKLVK GRKPYLHESR HQHALKRARG AGGRFLNSKS DDKEEHSDSS
     SRDKQDGVAP RDSGQPSTSP SSKGASSAKQ NKKSKTSN
//
DBGET integrated database retrieval system