ID A0A0E0FU17_ORYNI Unreviewed; 1181 AA.
AC A0A0E0FU17;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE RecName: Full=Helicase ATP-binding domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Oryza nivara (Indian wild rice) (Oryza sativa f. spontanea).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4536 {ECO:0000313|EnsemblPlants:ONIVA01G37590.3};
RN [1] {ECO:0000313|EnsemblPlants:ONIVA01G37590.3}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=SL10 {ECO:0000313|EnsemblPlants:ONIVA01G37590.3};
RA Wing R.A., Hsing Y.;
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:ONIVA01G37590.3}
RP IDENTIFICATION.
RC STRAIN=SL10 {ECO:0000313|EnsemblPlants:ONIVA01G37590.3};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
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DR AlphaFoldDB; A0A0E0FU17; -.
DR STRING; 4536.A0A0E0FU17; -.
DR EnsemblPlants; ONIVA01G37590.3; ONIVA01G37590.3; ONIVA01G37590.
DR Gramene; ONIVA01G37590.3; ONIVA01G37590.3; ONIVA01G37590.
DR eggNOG; KOG0947; Eukaryota.
DR OMA; YFIFSRR; -.
DR Proteomes; UP000006591; Unassembled WGS sequence.
DR GO; GO:0009507; C:chloroplast; IEA:EnsemblPlants.
DR GO; GO:0010494; C:cytoplasmic stress granule; IEA:EnsemblPlants.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003729; F:mRNA binding; IEA:EnsemblPlants.
DR GO; GO:1901259; P:chloroplast rRNA processing; IEA:EnsemblPlants.
DR GO; GO:0016554; P:cytidine to uridine editing; IEA:EnsemblPlants.
DR GO; GO:0009793; P:embryo development ending in seed dormancy; IEA:EnsemblPlants.
DR GO; GO:0000373; P:Group II intron splicing; IEA:EnsemblPlants.
DR GO; GO:0006397; P:mRNA processing; IEA:EnsemblPlants.
DR GO; GO:0010497; P:plasmodesmata-mediated intercellular transport; IEA:EnsemblPlants.
DR GO; GO:0016441; P:post-transcriptional gene silencing; IEA:EnsemblPlants.
DR CDD; cd18795; SF2_C_Ski2; 1.
DR Gene3D; 1.10.3380.30; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR012961; Ski2/MTR4_C.
DR PANTHER; PTHR12131; ATP-DEPENDENT RNA AND DNA HELICASE; 1.
DR PANTHER; PTHR12131:SF8; HELICASE SKI2W; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF08148; DSHCT; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM01142; DSHCT; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000006591};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..17
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 18..1181
FT /note="Helicase ATP-binding domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002359517"
FT DOMAIN 176..340
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 448..632
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 23..133
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 676..745
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 60..120
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1181 AA; 133707 MW; C400990363258A83 CRC64;
MHCLAPHFLL FLPLSSASRH ALPHTPPAPL LLPSHPAQAR AGPLRLPSAR SPSRAAAPVS
DDDEDEEDDE EIDIRDDADV DEEYDDDDDE ELDEESGVEE EEEEEEEGDD GVEELEEEEG
GREGTAARRR RSEEYKSQRV GKLVAEVREF GEDIIDYNEL AGIYDFPIDK FQRLAIQAFL
RGSSVVVSAP TSSGKTLIAE AAAVATVARG RRLFYTTPLK ALSNQKFRDF RNTFGDHNVG
LLTGDSAINK DAQILIMTTE ILRNMLYQSV GMAASEGRLF QVDVIVLDEV HYLSDISRGT
VWEETVIYCP KEVQLICLSA TVANPDELAG WIGQIHGKTE LVTSHKRPVP LTWHFSKKFA
LVPLLDGKGK KMNRKLRMSH FQNLSSPKSE FYYVKGKRKL RTTKNEQGNR SPLDISKQVQ
LSKHELTNMR RSQVPLIRDT LSQLWENDML PAIWFIFSRR GCDAAVEYLE DCRLLHDCEA
SEVELELKRF RMQYPDAIRE SAVKGLLRGV AAHHAGCLPL WKSFIEELFQ RGLVKVVFAT
ETLAAGINMP ARTSVISSLS KRIDAGRQLL TPNELFQMAG RAGRRGIDTV GHSVLVQTTY
EGPEECCDVI FAGLEPLVSQ FTASYGMVLN LLAGSKVTHN QKESDDIKVK RSGRTLEEAR
KLVEQSFGNY VGSNVMVAAK EELERIQSEI QYLSSEITDE SIDRKCREEL SEEDYAEISL
LQKKLKEEKQ MRNELKKRME LERMVAWKTR LEEFESGHLP FMCLQYKDKD SVQHTIPAVF
IGSLSSFADQ KIVSLILLQV ENDSPVAGKQ KVDNEGQQYY PSYYVALSSD NSWYLFTEKW
IKAVYKTGLP AVPSAEGGPL PRETLKQLLL REDMMWDKIA KSEYGSLLCM DGSLDTWSWS
LNVPVLNSLS EDDEVERFSQ EHQDAVECHK QQRKKVSQLK KTIRSTKGFK EFQKIIDMRN
FTKEKIERLE ARSRRLTRRI RQIEPTGWKE FLQISKVIQE ARALDINTQV IYPLGETAAA
IRGENELWLA MVLRNKVLLD LKPSQLAAIC GSLVSEGIKF RPWKNSSYVY EPSSVVTGVI
NYLEEQRNSL VDLQEKHSVK IPCEIDAQFA GMVEAWASGL TWREIMMDSA MDDGDLARLL
RRTIDLLAQI PKLPDIDPVL QKNAQIACNI MDRVPISELA G
//
