ID A0A0E0GA20_ORYNI Unreviewed; 1190 AA.
AC A0A0E0GA20;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE RecName: Full=MIF4G domain-containing protein {ECO:0000259|SMART:SM00543};
OS Oryza nivara (Indian wild rice) (Oryza sativa f. spontanea).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4536 {ECO:0000313|EnsemblPlants:ONIVA02G27340.2};
RN [1] {ECO:0000313|EnsemblPlants:ONIVA02G27340.2}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=SL10 {ECO:0000313|EnsemblPlants:ONIVA02G27340.2};
RA Wing R.A., Hsing Y.;
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:ONIVA02G27340.2}
RP IDENTIFICATION.
RC STRAIN=SL10 {ECO:0000313|EnsemblPlants:ONIVA02G27340.2};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
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DR AlphaFoldDB; A0A0E0GA20; -.
DR STRING; 4536.A0A0E0GA20; -.
DR EnsemblPlants; ONIVA02G27340.2; ONIVA02G27340.2; ONIVA02G27340.
DR Gramene; ONIVA02G27340.2; ONIVA02G27340.2; ONIVA02G27340.
DR eggNOG; KOG2051; Eukaryota.
DR HOGENOM; CLU_002633_2_0_1; -.
DR OMA; DFQHHQI; -.
DR Proteomes; UP000006591; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:InterPro.
DR Gene3D; 1.25.40.180; -; 3.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR003890; MIF4G-like_typ-3.
DR InterPro; IPR039762; Nmd2/UPF2.
DR InterPro; IPR007193; Upf2/Nmd2_C.
DR PANTHER; PTHR12839; NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2; 1.
DR PANTHER; PTHR12839:SF7; REGULATOR OF NONSENSE TRANSCRIPTS 2; 1.
DR Pfam; PF02854; MIF4G; 2.
DR Pfam; PF04050; Upf2; 1.
DR SMART; SM00543; MIF4G; 3.
DR SUPFAM; SSF48371; ARM repeat; 3.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Reference proteome {ECO:0000313|Proteomes:UP000006591}.
FT DOMAIN 65..287
FT /note="MIF4G"
FT /evidence="ECO:0000259|SMART:SM00543"
FT DOMAIN 471..659
FT /note="MIF4G"
FT /evidence="ECO:0000259|SMART:SM00543"
FT DOMAIN 674..875
FT /note="MIF4G"
FT /evidence="ECO:0000259|SMART:SM00543"
FT REGION 1..33
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 321..353
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 385..458
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 896..1003
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1023..1078
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1131..1172
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 329..344
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 385..403
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 418..458
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 896..915
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 916..934
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 935..956
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 957..991
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1138..1159
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1190 AA; 134732 MW; A1BD02867C28C7D9 CRC64;
MENTQNENSK EAKQDDETRQ NKQDDEEARL EEYKKLVDQK TALRRSNLNS ERPDANYLRT
LDSSIKRNTT VIKKLKTIND EQKDGLMDEL KSVNLSKFVS EAVSYICEAK LRSADIQAAV
QVCSLLHQRY KDFSPCLTQG LLKVFFPGKS GEDLDADKNS RAMKKRSTLK LLIELYFVGI
VEDASIFVNI IKDLTSLEHL KDRETTQANL SLLSAFARQG RFFIGLQSHG QEAYDELFKD
LNVTADQKKF FKKALNTYYD AVAELLQSEH ASLRLMEAEN AKVLTAKGEL SDENTASYEK
LRKSFDHLQR GVSSLAEALD MQPPVMPDDG NTTRVTTGSD VAPSTAKEPS ALEPIWDDED
TKAFYESLPD LRAFVPAVLL GEAEPKLNEK GREQSEPVAE QDTDVHDNPQ TSSITEYHLE
GKADDGVKDS EEKDKDKGKG VDKEKSKEKD FDRKTEREKE KIRAVDGASL DNLLQRLPGC
VSRDLIDQLT VEFCYLNSKA SRKKLVRTLF NVPRTSLELL PYYSRLVATL STCMKDVPSM
LLSMLEEEFN FLINKKDQIN IETKIKNIRF IGELCKFKIA PAALVFSCLK SCLDDFSHHN
IDVACNLLET CGRFLYRSPE TTIRMANMLE ILMRLKNVKN LDPRHSTLVE NAYYLCKPPE
RSARVSKVRP PLHQYIRKLL FSDLDKSSVE HVLRQLRKLP WVECQQYLIK CFLKVHKGKY
SHVHLIALLT AGLSRHHDDF AVSVVDEVLE EIRVGLELND YGMQQRRLAH MRFLGELYSY
KHIDSSVVFE TLYLIIVFGH GTPEQDVLDP PEDCFRIRLI ITLLQTCGHY FNRGSSKRKL
DKFLLHFQRY IISKGPLPLD IEFDVQDLFA ELRPNMARYS SVEELDAALL ELEESERAAS
VEKPENEKLS DSESQKVQPH DTAFSANGRS SANGAEENGK DHEGADSESY SDSGSIDGHE
DEEDLMFEDK SNDASENEGD DEDDGIPAGS DEDEGVEVRH KVVQVDPKEL EDFDRELKAL
LQESLESRKS EVRPRATLNM MVPMNVLEGS KDPRAVESES GEETVDEEGG SAGGGSKVRV
KVLMKKGHKQ QTKQMFVPGD CSLVQSTKQQ EAAELEEKQS IKRRILEYNE REEEEMNGGS
SQMGNWGQGG SNTGSSIRSG GRGIWDGSIR GGRQRHHIAG GFYHSYGRRR
//
