ID   A0A0E0GNE0_ORYNI        Unreviewed;       809 AA.
AC   A0A0E0GNE0;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   27-MAR-2024, entry version 39.
DE   RecName: Full=SAM-dependent MTase RsmB/NOP-type domain-containing protein {ECO:0000259|PROSITE:PS51686};
OS   Oryza nivara (Indian wild rice) (Oryza sativa f. spontanea).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=4536 {ECO:0000313|EnsemblPlants:ONIVA03G21230.1};
RN   [1] {ECO:0000313|EnsemblPlants:ONIVA03G21230.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=SL10 {ECO:0000313|EnsemblPlants:ONIVA03G21230.1};
RA   Wing R.A., Hsing Y.;
RL   Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:ONIVA03G21230.1}
RP   IDENTIFICATION.
RC   STRAIN=SL10 {ECO:0000313|EnsemblPlants:ONIVA03G21230.1};
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the class I-like SAM-binding methyltransferase
CC       superfamily. RsmB/NOP family. {ECO:0000256|ARBA:ARBA00007494,
CC       ECO:0000256|PROSITE-ProRule:PRU01023}.
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC       feature annotation. {ECO:0000256|PROSITE-ProRule:PRU01023}.
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DR   AlphaFoldDB; A0A0E0GNE0; -.
DR   STRING; 4536.A0A0E0GNE0; -.
DR   EnsemblPlants; ONIVA03G21230.1; ONIVA03G21230.1; ONIVA03G21230.
DR   Gramene; ONIVA03G21230.1; ONIVA03G21230.1; ONIVA03G21230.
DR   eggNOG; KOG2198; Eukaryota.
DR   HOGENOM; CLU_005316_4_3_1; -.
DR   OMA; YRTVNFA; -.
DR   Proteomes; UP000006591; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR   GO; GO:0016428; F:tRNA (cytidine-5-)-methyltransferase activity; IEA:InterPro.
DR   GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0030488; P:tRNA methylation; IEA:UniProt.
DR   Gene3D; 3.40.50.150; Vaccinia Virus protein VP39; 1.
DR   InterPro; IPR018314; Fmu/NOL1/Nop2p_CS.
DR   InterPro; IPR049560; MeTrfase_RsmB-F_NOP2_cat.
DR   InterPro; IPR001678; MeTrfase_RsmB-F_NOP2_dom.
DR   InterPro; IPR023267; RCMT.
DR   InterPro; IPR023270; RCMT_NCL1.
DR   InterPro; IPR029063; SAM-dependent_MTases_sf.
DR   PANTHER; PTHR22808; NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING; 1.
DR   PANTHER; PTHR22808:SF14; OS08G0484400 PROTEIN; 1.
DR   Pfam; PF01189; Methyltr_RsmB-F; 1.
DR   PRINTS; PR02008; RCMTFAMILY.
DR   PRINTS; PR02011; RCMTNCL1.
DR   SUPFAM; SSF53335; S-adenosyl-L-methionine-dependent methyltransferases; 1.
DR   PROSITE; PS01153; NOL1_NOP2_SUN; 1.
DR   PROSITE; PS51686; SAM_MT_RSMB_NOP; 1.
PE   3: Inferred from homology;
KW   Methyltransferase {ECO:0000256|ARBA:ARBA00022603, ECO:0000256|PROSITE-
KW   ProRule:PRU01023}; Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006591};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW   ProRule:PRU01023};
KW   S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691,
KW   ECO:0000256|PROSITE-ProRule:PRU01023};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|PROSITE-
KW   ProRule:PRU01023}; tRNA processing {ECO:0000256|ARBA:ARBA00022694};
KW   tRNA-binding {ECO:0000256|ARBA:ARBA00022555}.
FT   DOMAIN          97..520
FT                   /note="SAM-dependent MTase RsmB/NOP-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51686"
FT   REGION          52..73
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   ACT_SITE        358
FT                   /note="Nucleophile"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
FT   BINDING         244
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
FT   BINDING         305
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
SQ   SEQUENCE   809 AA;  91515 MW;  B55DAA9E2EBD8093 CRC64;
     MIASRTPVSL HSLLVAGGHG KRCVAGAGGR KRGRVQRRHL TQALESFWRH APRPAPPAAA
     ARGEANRSWQ PPPLENPAFE EYYKEQRIVR EEEWDDFISV LRKPLPATFR INASSQFFKD
     ICSKLENDFK RYLESEVSDE YGEDAIRPLP WYPGNLAWHL NFSRKQLRKN QALESFHEFL
     KHESEVGNIT RQEAVSMVPP LFLNIQPDHH VLDTPGSKTF QLLEMIHQSK EPGLLPRALV
     VANDVNAQRC DLLIHNMKRM CTANLIVTNH EAQNFPDCRI ANDLSEIYKK DCKPQRLEFD
     RVLCDVPCSG DGTIRKGHDM WRKWNSGMGN GLHLLQVDIS MRGIALLKVG GRMVYSTCSM
     NPVENEAVIA ELLRRSGNSV ELLDVSNELP ELVHRPGLST WKVQDKGSWF QNHDDVPCDR
     KNVILPSMFP SNKSIQEGQS VCDDIEVNTG SNGSFSRNFS IEKTNKVYCD TDGISNSNTT
     KHSDSTPNST SSNFPLHRCM RIVPHDQDSG AFFIAVLHKL SPLHECQMVE VTKTEVLDDD
     ESLEEQKKIS IDAHTSEDSN LTEVALVTDD VKNDQAESGN RMNKLQDQCK WKGVDPVLFF
     RDLTVIKSIV SFFAINISFP LEGHLVTRSA DPNNARRIYY VSKSVQEILQ LNVEVGEQLK
     IASLGLKMFE THRSKDGCPC AYRLSYEGLP LLLPYISKRI LCASPNDFLR LLQYRTVNFA
     HFINARFGEE AASLIPGCCV VILREGHQNL DLGSITMDPT TIAIVCWRGK ATLNAMVSPP
     DRKELLERIT QRFGLKALRV EEENPRRQN
//