ID A0A0E0GR57_ORYNI Unreviewed; 779 AA.
AC A0A0E0GR57;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 41.
DE RecName: Full=NOT2/NOT3/NOT5 C-terminal domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Oryza nivara (Indian wild rice) (Oryza sativa f. spontanea).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4536 {ECO:0000313|EnsemblPlants:ONIVA03G28850.1};
RN [1] {ECO:0000313|EnsemblPlants:ONIVA03G28850.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=SL10 {ECO:0000313|EnsemblPlants:ONIVA03G28850.1};
RA Wing R.A., Hsing Y.;
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:ONIVA03G28850.1}
RP IDENTIFICATION.
RC STRAIN=SL10 {ECO:0000313|EnsemblPlants:ONIVA03G28850.1};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|PIRNR:PIRNR005290}.
CC Nucleus {ECO:0000256|ARBA:ARBA00004123, ECO:0000256|PIRNR:PIRNR005290}.
CC -!- SIMILARITY: Belongs to the CNOT2/3/5 family.
CC {ECO:0000256|ARBA:ARBA00007682, ECO:0000256|PIRNR:PIRNR005290}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR AlphaFoldDB; A0A0E0GR57; -.
DR STRING; 4536.A0A0E0GR57; -.
DR EnsemblPlants; ONIVA03G28850.1; ONIVA03G28850.1; ONIVA03G28850.
DR Gramene; ONIVA03G28850.1; ONIVA03G28850.1; ONIVA03G28850.
DR eggNOG; KOG2150; Eukaryota.
DR HOGENOM; CLU_013819_3_0_1; -.
DR OMA; YKPQTPY; -.
DR Proteomes; UP000006591; Unassembled WGS sequence.
DR GO; GO:0030015; C:CCR4-NOT core complex; IEA:UniProtKB-UniRule.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000932; C:P-body; IEA:UniProtKB-UniRule.
DR GO; GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IEA:UniProtKB-UniRule.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 2.30.30.1020; CCR4-NOT complex subunit 2/3/5, C-terminal domain; 1.
DR InterPro; IPR038635; CCR4-NOT_su2/3/5_C_sf.
DR InterPro; IPR012270; CCR4-NOT_su3/5.
DR InterPro; IPR040168; Not2/3/5.
DR InterPro; IPR007282; NOT2/3/5_C.
DR InterPro; IPR007207; Not_N.
DR PANTHER; PTHR23326; CCR4 NOT-RELATED; 1.
DR PANTHER; PTHR23326:SF1; CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3; 1.
DR Pfam; PF04153; NOT2_3_5_C; 1.
DR Pfam; PF04065; Not3; 1.
DR PIRSF; PIRSF005290; NOT_su_3_5; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|PIRNR:PIRNR005290};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PIRNR:PIRNR005290};
KW Phosphoprotein {ECO:0000256|ARBA:ARBA00022553};
KW Reference proteome {ECO:0000313|Proteomes:UP000006591};
KW Repressor {ECO:0000256|ARBA:ARBA00022491, ECO:0000256|PIRNR:PIRNR005290};
KW Transcription {ECO:0000256|ARBA:ARBA00023163,
KW ECO:0000256|PIRNR:PIRNR005290};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015,
KW ECO:0000256|PIRNR:PIRNR005290}.
FT DOMAIN 2..151
FT /note="CCR4-Not complex component Not N-terminal"
FT /evidence="ECO:0000259|Pfam:PF04065"
FT DOMAIN 633..770
FT /note="NOT2/NOT3/NOT5 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF04153"
FT REGION 24..48
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 182..240
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 287..317
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 394..413
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 481..594
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 48..75
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 34..48
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 287..304
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 394..412
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 481..536
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 555..571
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 779 AA; 84944 MW; 72987B088DB4A6E3 CRC64;
MDARKQIERE MERFKVCEKE TKTKAFSKEG LGQQPKTDPK EKAKAETRDW LNNVVSDLEN
QIDNFEAEVE GLSIKKGKQR PPRLVHLEKS ITRHKAHIKK LESILRLLDN DELSPEQVND
VKDFLDDYVE RNQEDFDEFS DVEELYSTLP MEKVEALEDM VSLAPSSLVK GVASVSTTAV
LSTKSSVATS PTQATVSAAP SLSVSQDQAE ETASQESNPE SAPQTPPSKV GSQPSVPVVP
TTISTSTAAV SVSAETISSP VRPIVPTTTA AVLPASVTAR SAPENIPAVT SAPANSSSTL
KDDDNMSFPP RRSSPAVTEI GLGRGITRGL TSQGLGSAPI SIGPVSGNGS VSALTDLSKR
NMLNTDERIN SGGISQQLIS PLGNKAQPQQ VLRTTDTISS DSSNTNESTV LGGRIFSPPV
VSGVQWRPQN TAGLQNQSEA GQFRGRPEIS ADQREKYLQR LQQVQQQGSL LNVSHITGIS
QKQFPSQQPN PLLQQFNSQS SSISSQAGIG LGQVQVPESG HTKSEEQQQS FAEDVSVESV
ATAGANKHMS EDDTKIPFSN PSASITEGTQ LSRDPDLPAG QPLQPGMSSS GVGVIGRRSV
SDLGAIGDNL SVASASTSHD LLYNLQMLEA AFHRLPQPKD SERVKNYIPK HPAVTPASFP
QIQAPVVSNP AFWERMGGDS LSTDLLFFAF YYQQNTYQQF LSARELKKQS WRFHRKYNTW
FQRHVEPQVT TDEYERGSYV YFDFHVIDDG TGSGWCQRIK NDFTFEYNFL EDELSVQTN
//
