ID A0A0E0HXI8_ORYNI Unreviewed; 638 AA.
AC A0A0E0HXI8;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 43.
DE RecName: Full=Ku domain-containing protein {ECO:0000259|SMART:SM00559};
OS Oryza nivara (Indian wild rice) (Oryza sativa f. spontanea).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4536 {ECO:0000313|EnsemblPlants:ONIVA07G04290.1};
RN [1] {ECO:0000313|EnsemblPlants:ONIVA07G04290.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=SL10 {ECO:0000313|EnsemblPlants:ONIVA07G04290.1};
RA Wing R.A., Hsing Y.;
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:ONIVA07G04290.1}
RP IDENTIFICATION.
RC STRAIN=SL10 {ECO:0000313|EnsemblPlants:ONIVA07G04290.1};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the ku70 family.
CC {ECO:0000256|ARBA:ARBA00005240}.
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DR AlphaFoldDB; A0A0E0HXI8; -.
DR STRING; 4536.A0A0E0HXI8; -.
DR EnsemblPlants; ONIVA07G04290.1; ONIVA07G04290.1; ONIVA07G04290.
DR Gramene; ONIVA07G04290.1; ONIVA07G04290.1; ONIVA07G04290.
DR eggNOG; KOG2327; Eukaryota.
DR OMA; FWANVKH; -.
DR Proteomes; UP000006591; Unassembled WGS sequence.
DR GO; GO:0043564; C:Ku70:Ku80 complex; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR GO; GO:0003678; F:DNA helicase activity; IEA:InterPro.
DR GO; GO:0003690; F:double-stranded DNA binding; IEA:EnsemblPlants.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0042162; F:telomeric DNA binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0006303; P:double-strand break repair via nonhomologous end joining; IEA:EnsemblPlants.
DR GO; GO:0009408; P:response to heat; IEA:EnsemblPlants.
DR GO; GO:0000723; P:telomere maintenance; IEA:EnsemblPlants.
DR CDD; cd00788; KU70; 1.
DR CDD; cd01458; vWA_ku; 1.
DR Gene3D; 1.10.1600.10; -; 1.
DR Gene3D; 2.40.290.10; -; 1.
DR Gene3D; 4.10.970.10; Ku70, bridge and pillars; 1.
DR Gene3D; 1.10.720.30; SAP domain; 1.
DR Gene3D; 3.40.50.410; von Willebrand factor, type A domain; 1.
DR InterPro; IPR006165; Ku70.
DR InterPro; IPR006164; Ku70/Ku80_beta-barrel_dom.
DR InterPro; IPR027388; Ku70_bridge/pillars_dom_sf.
DR InterPro; IPR047087; KU70_core_dom.
DR InterPro; IPR005160; Ku_C.
DR InterPro; IPR005161; Ku_N.
DR InterPro; IPR003034; SAP_dom.
DR InterPro; IPR036361; SAP_dom_sf.
DR InterPro; IPR016194; SPOC-like_C_dom_sf.
DR InterPro; IPR036465; vWFA_dom_sf.
DR NCBIfam; TIGR00578; ku70; 1.
DR PANTHER; PTHR12604; KU AUTOANTIGEN DNA HELICASE; 1.
DR PANTHER; PTHR12604:SF2; X-RAY REPAIR CROSS-COMPLEMENTING PROTEIN 6; 1.
DR Pfam; PF02735; Ku; 1.
DR Pfam; PF03730; Ku_C; 1.
DR Pfam; PF03731; Ku_N; 1.
DR Pfam; PF02037; SAP; 1.
DR PIRSF; PIRSF003033; Ku70; 1.
DR SMART; SM00559; Ku78; 1.
DR SUPFAM; SSF68906; SAP domain; 1.
DR SUPFAM; SSF100939; SPOC domain-like; 1.
DR SUPFAM; SSF53300; vWA-like; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000006591}.
FT DOMAIN 315..458
FT /note="Ku"
FT /evidence="ECO:0000259|SMART:SM00559"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 638 AA; 71559 MW; 0F3E1A8F55376CEA CRC64;
MDLDPEGLFR DDSDEDDDNV QEREANKEMV VYLIDASPKM FTPATKADEK EETHFHTIVN
CITHALKTQI IGRSYDEVAI CFFNTKEKKN LQELAGVYVY NVTEREPLDR PDARLIKEFS
CIEDSFMSNI GSRYGITSGS RENTLYNALW VAQALLRKGS VKTVSKRIVI FTNEDDPFGG
LTGAVKTDMI RTTIQRARDA QDLGLSIELL PLSRPDEEFN ISLFYADLIG LEGDEIVDYL
PSSGEKLEDM TNQLKKRMMK KRKVKTLAFA ITNDVCIEVN TYALIRPTTP GAITWLDSIS
NLPLKAERSF ICNDTGALLQ DPQKRFQVYN DKIVKFSTRE LSDVKRVSSH HLRLLGFKPL
DYLKDYHNLR PSTFIYPSDE QIFGSTRVFV ALHSSMRRLG RFALAFYGNP TRPQLVALIA
QEEVTSAGGQ IEPPGIHMIY LPYSDDVRYP EEVHLTSDDA PRATDEQIKK ASNLLRRIDL
KNFSVCQFSN PALQRHYGIL EALALGEDEM PDVKDETLPD EEGLARPVVV KAVEEFKASV
YGENYDQEEA EAAAAKAGAS KKRKALTDAA AEKSAAHNWA ELADTGKLKD MTVVDLKSYL
SAHGLPVSGK KEALKGMSNV SSIVQQYRLC CSCNVSAR
//
