ID   A0A0E0IIQ3_ORYNI        Unreviewed;      1435 AA.
AC   A0A0E0IIQ3;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   27-MAR-2024, entry version 41.
DE   RecName: Full=BED-type domain-containing protein {ECO:0000259|PROSITE:PS50808};
OS   Oryza nivara (Indian wild rice) (Oryza sativa f. spontanea).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=4536 {ECO:0000313|EnsemblPlants:ONIVA09G07610.1};
RN   [1] {ECO:0000313|EnsemblPlants:ONIVA09G07610.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=SL10 {ECO:0000313|EnsemblPlants:ONIVA09G07610.1};
RA   Wing R.A., Hsing Y.;
RL   Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:ONIVA09G07610.1}
RP   IDENTIFICATION.
RC   STRAIN=SL10 {ECO:0000313|EnsemblPlants:ONIVA09G07610.1};
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
CC   -!- SUBUNIT: Homodimer. {ECO:0000256|ARBA:ARBA00011738}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR   STRING; 4536.A0A0E0IIQ3; -.
DR   EnsemblPlants; ONIVA09G07610.1; ONIVA09G07610.1; ONIVA09G07610.
DR   Gramene; ONIVA09G07610.1; ONIVA09G07610.1; ONIVA09G07610.
DR   eggNOG; KOG1121; Eukaryota.
DR   HOGENOM; CLU_252223_0_0_1; -.
DR   OMA; GMEQDCD; -.
DR   Proteomes; UP000006591; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR   GO; GO:0009791; P:post-embryonic development; IEA:UniProt.
DR   InterPro; IPR025525; hAT-like_transposase_RNase-H.
DR   InterPro; IPR008906; HATC_C_dom.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR003656; Znf_BED.
DR   InterPro; IPR036236; Znf_C2H2_sf.
DR   PANTHER; PTHR34396; OS03G0264950 PROTEIN-RELATED; 1.
DR   PANTHER; PTHR34396:SF24; OS09G0382120 PROTEIN; 1.
DR   Pfam; PF05699; Dimer_Tnp_hAT; 2.
DR   Pfam; PF14372; hAT-like_RNase-H; 2.
DR   Pfam; PF02892; zf-BED; 1.
DR   SMART; SM00614; ZnF_BED; 2.
DR   SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 2.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 2.
DR   PROSITE; PS50808; ZF_BED; 2.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006591};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00027}.
FT   DOMAIN          78..130
FT                   /note="BED-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50808"
FT   DOMAIN          735..793
FT                   /note="BED-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50808"
FT   REGION          22..50
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          829..913
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        852..866
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        897..913
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1435 AA;  164703 MW;  A13F899BDCF25A89 CRC64;
     MKVASKEPRR VHPVVLACVH NGMDDQECGG PSGGVGKQED GEMNGTENEV DDADDMVEQE
     ESSGSAPSPL LLGTRPKRLR SKVWDDFTPI FVDGKVARAE CMHCHRVFNS GTSNLLKHQA
     KCSPRAQKRP MQQELPVSLS VENRSPKELD AVEQDIPTDK NTKNLEVEQA ETNKLVRTLA
     MYGDIPLRVS NHGEFSRFVA SLNPMVEIPP ADNLYLYFTG LFEEEKAKLK KRLASLNSRV
     SLSVYVWHYD TLLPFLCLSV HYIDDQWQKD KKIIAFQAVD SSCHAKELSM VILTAIRDWG
     LFGKVFSIAL DDAFIDDSVA SDVKDILQKW NSLHADESLS GNQSLFVIIQ VGLDELDKIT
     EKSRKFSKLD KFMERLQSTL ALRQKDLHRE PVYYSDEESS YVREKMQRKF KEQWKFNCLH
     ICMPMIMDPK YRLEIIKSRI MYNFNSDMED YIEEVNDMLL RLFREYSGQT EDPNCTSSFI
     TSGWNYLYKD DRLLDHYHYS EFPERKRPMT EFDQYLEDPC LSNDGTSVLK WWKEHSMIYP
     TIARIARDIL AIPYRTDCKV ATRTTRVAIA KSDGNHYVEE RILVQHDAVR KEQRLNYSKS
     TQVQNWSSSA SLLGRTKMVK WALGFQAWAP WKSGAQTKRE EKSSLPKRVA AAAEVAARNP
     ALRPGIGMEQ DCDDAANQVG AGEERILNVV LLKTCVKHNF IGMGDNVDNA NDMAEQEESS
     GSAPSPLFLG TRPKRLRSKA WDDFTPIYID GKVAKAECMH CHQVFVSNST SGTSSLLKHQ
     SKCNPHAQKR AMQQKLPFLP SSQKNLTTLN SDPRQKKLLF LPISQKKCSD TADVMPHKKD
     PALPNSMNDT NRKSQEVDKS GSREELATPE QKNLTLRHVP TNNNDQSHDE HPVPEQKNNP
     IGTNMKNPET DQNGSNGLIQ TMAMCGYLPL MMHNDRFRKC LPCFDSMVNM PANINIYLDF
     IQPFDKEKAK LKESVHYIDE ERERQQKIIR FCHVGPSCDA GELSSVILGA IEKWGLRDKV
     FSIVLDDEFV DDSVASNVKA HLQKWNFHRA KQSFQESNSH CKTELPGIEF TLQNRASRNR
     IHTAKQSLFV IRYGTHLLDQ VIQVGLDELD KIMEKSVMCS KFMEGLTSSA VKYSNNNYAA
     SGKDWTCARR ICDTLEDFHR CIGIMPNFPC PVDLFDMVWK VKRDLQREVD NNRDDSFSTV
     VKKMQEKFKN CWKLCCLHFY LAMVVDPSHR LEHIKFRVRL HTDTDYIHYM HDIFLNLFDE
     YSGKVEDTNC TSETRTEVGV DGGDDRLKYY RQYENPICER PMTELDQYLQ ESRLSGGERD
     VLRWWKGHNL TYPTVARMAR DILAIPCRTY FNIATRTAKF AIRESRRNFY IEELVCFQDW
     LTSDGRSRLV VLLSEINIQV SKGKGFHDLS MTKCTNDNFV QAILGIMPSS FAKYD
//