ID A0A0E0J5B7_ORYNI Unreviewed; 588 AA.
AC A0A0E0J5B7;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE RecName: Full=ATP-dependent DNA helicase {ECO:0000256|RuleBase:RU364117};
DE EC=3.6.4.12 {ECO:0000256|RuleBase:RU364117};
GN Name=BBa0083C03.50 {ECO:0000313|EMBL:BBF89678.1};
OS Oryza nivara (Indian wild rice) (Oryza sativa f. spontanea).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4536 {ECO:0000313|EnsemblPlants:ONIVA11G22580.1};
RN [1] {ECO:0000313|EnsemblPlants:ONIVA11G22580.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=SL10 {ECO:0000313|EnsemblPlants:ONIVA11G22580.1};
RA Wing R.A., Hsing Y.;
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:ONIVA11G22580.1}
RP IDENTIFICATION.
RC STRAIN=SL10 {ECO:0000313|EnsemblPlants:ONIVA11G22580.1};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
RN [3] {ECO:0000313|EMBL:BBF89678.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=W0106 {ECO:0000313|EMBL:BBF89678.1};
RA Wu J., Kanamori H.;
RT "Oryza nivara genomic DNA, chromosome 11, BAC clone:BBa0083C03.";
RL Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.12;
CC Evidence={ECO:0000256|ARBA:ARBA00001665,
CC ECO:0000256|RuleBase:RU364117};
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU364117}.
CC -!- SIMILARITY: Belongs to the helicase family. RecQ subfamily.
CC {ECO:0000256|ARBA:ARBA00005446, ECO:0000256|RuleBase:RU364117}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AP018868; BBF89678.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0E0J5B7; -.
DR SMR; A0A0E0J5B7; -.
DR STRING; 4536.A0A0E0J5B7; -.
DR EnsemblPlants; ONIVA11G22580.1; ONIVA11G22580.1; ONIVA11G22580.
DR Gramene; ONIVA11G22580.1; ONIVA11G22580.1; ONIVA11G22580.
DR eggNOG; KOG0351; Eukaryota.
DR HOGENOM; CLU_001103_9_6_1; -.
DR OMA; RYVIHYN; -.
DR Proteomes; UP000006591; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR CDD; cd17920; DEXHc_RecQ; 1.
DR CDD; cd18794; SF2_C_RecQ; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR InterPro; IPR004589; DNA_helicase_ATP-dep_RecQ.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR032284; RecQ_Zn-bd.
DR NCBIfam; TIGR00614; recQ_fam; 1.
DR PANTHER; PTHR13710:SF105; BLOOM SYNDROME PROTEIN; 1.
DR PANTHER; PTHR13710; DNA HELICASE RECQ FAMILY MEMBER; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF16124; RecQ_Zn_bind; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU364117};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000256|RuleBase:RU364117};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|RuleBase:RU364117};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU364117}; Nucleus {ECO:0000256|RuleBase:RU364117};
KW Reference proteome {ECO:0000313|Proteomes:UP000006591}.
FT DOMAIN 195..371
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 393..543
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
SQ SEQUENCE 588 AA; 65719 MW; D13BDA17F0A883BA CRC64;
MAGYEREKKR LLDLAADSGF ERDLAADCLD RIVRLYGEGG QGFITVENCG DDFLGALADA
TNNNDDWDDL NAIENEACGN LNGMMKHGVI DDKEVEVRTP LFRQAESSAR QTRINLDSFG
FSSDDDFETL ESHCDRSVST QKKVNRGNNR CESSTSTSNR ETLSYQQLYS LDDINFANVV
IFGNKSFRPL QYEACRAAVS NMDTFVLMPT GGGKSLCYQL PATLHPGVTV VVCPLLSLIE
DQIVALNFKF AIPAAFLNSQ QTPSQSSAVI QELRSGKPSF KLLYVTPERM AGNSSFIGIL
IGLHQRGLLA RFVIDEAHCV SQWGHDFRPD YRGLGCLKQN FPRVPIMALT ATATASVCKD
ILSTLRIPNA TVLKRSFDRT NLNYEVIGKT KTPQKQLGDL LKERFMNMSG IVYCLSKNEC
ADTAKFLREK YKIKCAHYHA GLAARQRSNV QGKWHSGEVK VICATIAFGM GIDKPDVRFV
IHNTMSKSIE SYYQESGRAG RDNLPAHCIV LYQKKDLGRI VCMLRNSGNF KSESFKVAME
QAKKMQTYCE LKTECRRQTL LGHFGEQYDR QRCKHGCSPC DNCIKIPS
//
