ID A0A0E0KJK9_ORYPU Unreviewed; 570 AA.
AC A0A0E0KJK9;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=5'-nucleotidase {ECO:0008006|Google:ProtNLM};
OS Oryza punctata (Red rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4537 {ECO:0000313|EnsemblPlants:OPUNC03G32820.1};
RN [1] {ECO:0000313|EnsemblPlants:OPUNC03G32820.1}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:OPUNC03G32820.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|PIRSR:PIRSR017434-2};
CC Note=Binds 1 Mg(2+) ion per subunit. {ECO:0000256|PIRSR:PIRSR017434-2};
CC -!- SIMILARITY: Belongs to the 5'(3')-deoxyribonucleotidase family.
CC {ECO:0000256|ARBA:ARBA00009589}.
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DR AlphaFoldDB; A0A0E0KJK9; -.
DR STRING; 4537.A0A0E0KJK9; -.
DR EnsemblPlants; OPUNC03G32820.1; OPUNC03G32820.1; OPUNC03G32820.
DR Gramene; OPUNC03G32820.1; OPUNC03G32820.1; OPUNC03G32820.
DR eggNOG; KOG2469; Eukaryota.
DR HOGENOM; CLU_017845_3_0_1; -.
DR OMA; WDYTDAV; -.
DR Proteomes; UP000026962; Chromosome 3.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd07522; HAD_cN-II; 1.
DR Gene3D; 3.40.50.1000; HAD superfamily/HAD-like; 2.
DR InterPro; IPR036412; HAD-like_sf.
DR InterPro; IPR008380; HAD-SF_hydro_IG_5-nucl.
DR InterPro; IPR023214; HAD_sf.
DR InterPro; IPR016695; Pur_nucleotidase.
DR NCBIfam; TIGR02244; HAD-IG-Ncltidse; 1.
DR PANTHER; PTHR12103; 5'-NUCLEOTIDASE DOMAIN-CONTAINING; 1.
DR PANTHER; PTHR12103:SF15; CYTOSOLIC PURINE 5'-NUCLEOTIDASE; 1.
DR Pfam; PF05761; 5_nucleotid; 1.
DR PIRSF; PIRSF017434; Purine_5'-nucleotidase; 1.
DR SUPFAM; SSF56784; HAD-like; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842, ECO:0000256|PIRSR:PIRSR017434-2};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW ECO:0000256|PIRSR:PIRSR017434-2};
KW Reference proteome {ECO:0000313|Proteomes:UP000026962}.
FT ACT_SITE 101
FT /note="Nucleophile"
FT /evidence="ECO:0000256|PIRSR:PIRSR017434-1"
FT ACT_SITE 103
FT /note="Proton donor"
FT /evidence="ECO:0000256|PIRSR:PIRSR017434-1"
FT BINDING 101
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000256|PIRSR:PIRSR017434-2"
FT BINDING 103
FT /ligand="GMP"
FT /ligand_id="ChEBI:CHEBI:58115"
FT /evidence="ECO:0000256|PIRSR:PIRSR017434-2"
FT BINDING 406
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000256|PIRSR:PIRSR017434-2"
SQ SEQUENCE 570 AA; 65146 MW; 63674E165B8E081B CRC64;
MLFSRRPLAT AARHLAPFSP PLLLFFASAS SSCSSSAASA SSASGPRGCS AVRMETGAVE
PASTGAIWST PSVEPRTISV GKEIFCNRSL NMRNITAVGF DMDYTLAQYK PETFEALAYH
GTIEKLVKDL GYPEELLTWQ FDWKYMVRGL VLDKKRGNIL KMDRHKYVKV AYHGFREMSK
EEKVSAYGST LIRDSFDEPD YALIDTLFSL GEAYLFAQLV DFMDNNPGKV PSGTDYPLMY
RDVRSAVDLC HRDGTLKRMV AKDPSRYINE DLAIVPMLEM IRKSGRSTFL VTNSLWDYTD
VVMNYLCRPY TSDVSSSHNH KWLGYFDVVI TGSAKPGFFH DGNRAGLFEV EPDSGKLLNA
DLHIGSPRSG QQPSRPIHKV YQGGNVGHLH RLLSVASSSQ ILYVGDHIYG DILRSKKVLG
WRTMLVIPEL EQEVKLLSES KSTRKELRHL RMERDSIEDK IHRLEWSLKF ENLTEDEKEK
LFSEHDILLQ KKEHVRRLHQ EAQRQHHHKF HKVWGQLMKT GYQNSRFAHQ VERFACLYSS
QVTNFALYSP NKYYRPSEDY MPHEFDVLGL
//
