ID A0A0E0KRR4_ORYPU Unreviewed; 372 AA.
AC A0A0E0KRR4;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE RecName: Full=snRNP core protein D1 {ECO:0000256|ARBA:ARBA00033121};
OS Oryza punctata (Red rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4537 {ECO:0000313|EnsemblPlants:OPUNC04G13550.1};
RN [1] {ECO:0000313|EnsemblPlants:OPUNC04G13550.1}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:OPUNC04G13550.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the TMEM14 family.
CC {ECO:0000256|ARBA:ARBA00007590}.
CC -!- SIMILARITY: Belongs to the snRNP core protein family.
CC {ECO:0000256|ARBA:ARBA00008146}.
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DR AlphaFoldDB; A0A0E0KRR4; -.
DR STRING; 4537.A0A0E0KRR4; -.
DR EnsemblPlants; OPUNC04G13550.1; OPUNC04G13550.1; OPUNC04G13550.
DR Gramene; OPUNC04G13550.1; OPUNC04G13550.1; OPUNC04G13550.
DR eggNOG; KOG3428; Eukaryota.
DR eggNOG; KOG4267; Eukaryota.
DR HOGENOM; CLU_744706_0_0_1; -.
DR Proteomes; UP000026962; Chromosome 4.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0000387; P:spliceosomal snRNP assembly; IEA:InterPro.
DR CDD; cd01724; Sm_D1; 1.
DR Gene3D; 2.30.30.100; -; 1.
DR Gene3D; 1.10.10.1740; Transmembrane protein 14-like; 1.
DR InterPro; IPR027141; LSm4/Sm_D1/D3.
DR InterPro; IPR010920; LSM_dom_sf.
DR InterPro; IPR047575; Sm.
DR InterPro; IPR034102; Sm_D1.
DR InterPro; IPR001163; Sm_dom_euk/arc.
DR InterPro; IPR005349; TMEM14.
DR InterPro; IPR044890; TMEM14_sf.
DR PANTHER; PTHR23338; SMALL NUCLEAR RIBONUCLEOPROTEIN SM; 1.
DR PANTHER; PTHR23338:SF18; SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1; 1.
DR Pfam; PF01423; LSM; 1.
DR Pfam; PF03647; Tmemb_14; 1.
DR SMART; SM00651; Sm; 1.
DR SUPFAM; SSF50182; Sm-like ribonucleoproteins; 1.
DR PROSITE; PS52002; SM; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000026962};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 104..125
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 131..152
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 159..177
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 260..332
FT /note="Sm"
FT /evidence="ECO:0000259|PROSITE:PS52002"
FT REGION 225..254
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 345..372
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 225..239
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 240..254
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 351..372
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 372 AA; 40318 MW; 3C4051B7B6086A69 CRC64;
MAVAAQLHGS AAAAAAAYRR LPLYRVPSSC RWPENPLAGS PKLSISTGRV EMKPFGAGAK
VSTKCANGTT RVDELNFRSN QTEESVEADE DTHIQKRSAK IHDFCFGIPF GGLLFCMGLL
GYIFSRSTIS LVLGVAPGLA MLFLGTLSLN FWRSGKSSFI VILGQAAISV VLAWKYSHAY
ILTNRILPWA FYASLSVKEA QERPKLANKT AWRLGQIKLG FCSSRSEKAN SSSSADSTRG
SSPPPPPPPP PLLPPAAKMK LVRFLMKLNN ETVTIELKNG TVVHGTITGV DISMNTHLKT
VKLTLKGKNP VTLDHLSVRG NNIRYYILPD SLNLETLLVE DTPRVKAKKP TAGKPLGRGR
GRGRGRGRGR GR
//
