ID   A0A0E0M4Q5_ORYPU        Unreviewed;       316 AA.
AC   A0A0E0M4Q5;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   27-MAR-2024, entry version 40.
DE   RecName: Full=Cupin type-1 domain-containing protein {ECO:0000259|SMART:SM00835};
OS   Oryza punctata (Red rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=4537 {ECO:0000313|EnsemblPlants:OPUNC09G18460.1};
RN   [1] {ECO:0000313|EnsemblPlants:OPUNC09G18460.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Wing R.;
RT   "Oryza genome evolution.";
RL   Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:OPUNC09G18460.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
CC   -!- SUBUNIT: Oligomer (believed to be a pentamer but probably hexamer).
CC       {ECO:0000256|ARBA:ARBA00011268}.
CC   -!- SUBCELLULAR LOCATION: Secreted, extracellular space, apoplast
CC       {ECO:0000256|ARBA:ARBA00004271}.
CC   -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eS25 family.
CC       {ECO:0000256|ARBA:ARBA00009106}.
CC   -!- SIMILARITY: Belongs to the germin family.
CC       {ECO:0000256|ARBA:ARBA00007456}.
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DR   AlphaFoldDB; A0A0E0M4Q5; -.
DR   STRING; 4537.A0A0E0M4Q5; -.
DR   EnsemblPlants; OPUNC09G18460.1; OPUNC09G18460.1; OPUNC09G18460.
DR   Gramene; OPUNC09G18460.1; OPUNC09G18460.1; OPUNC09G18460.
DR   eggNOG; KOG1767; Eukaryota.
DR   HOGENOM; CLU_881053_0_0_1; -.
DR   OMA; FRNATSM; -.
DR   Proteomes; UP000026962; Chromosome 9.
DR   GO; GO:0048046; C:apoplast; IEA:UniProtKB-SubCell.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0030145; F:manganese ion binding; IEA:InterPro.
DR   CDD; cd02241; cupin_OxOx; 1.
DR   Gene3D; 3.30.63.20; -; 1.
DR   Gene3D; 2.60.120.10; Jelly Rolls; 1.
DR   InterPro; IPR006045; Cupin_1.
DR   InterPro; IPR001929; Germin.
DR   InterPro; IPR004977; Ribosomal_eS25.
DR   InterPro; IPR014710; RmlC-like_jellyroll.
DR   InterPro; IPR011051; RmlC_Cupin_sf.
DR   PANTHER; PTHR12850; 40S RIBOSOMAL PROTEIN S25; 1.
DR   PANTHER; PTHR12850:SF38; 40S RIBOSOMAL PROTEIN S25; 1.
DR   Pfam; PF00190; Cupin_1; 1.
DR   Pfam; PF03297; Ribosomal_S25; 1.
DR   PRINTS; PR00325; GERMIN.
DR   SMART; SM00835; Cupin_1; 1.
DR   SUPFAM; SSF51182; RmlC-like cupins; 1.
PE   3: Inferred from homology;
KW   Apoplast {ECO:0000256|ARBA:ARBA00022523};
KW   Manganese {ECO:0000256|PIRSR:PIRSR601929-1};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Metal-binding {ECO:0000256|PIRSR:PIRSR601929-1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000026962};
KW   Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW   Ribosomal protein {ECO:0000256|ARBA:ARBA00022980};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        88..115
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          160..303
FT                   /note="Cupin type-1"
FT                   /evidence="ECO:0000259|SMART:SM00835"
FT   REGION          1..36
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   BINDING         202
FT                   /ligand="oxalate"
FT                   /ligand_id="ChEBI:CHEBI:30623"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR601929-1"
FT   BINDING         205
FT                   /ligand="Mn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29035"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR601929-2"
FT   BINDING         207
FT                   /ligand="Mn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29035"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR601929-2"
FT   BINDING         207
FT                   /ligand="oxalate"
FT                   /ligand_id="ChEBI:CHEBI:30623"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR601929-1"
FT   BINDING         212
FT                   /ligand="Mn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29035"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR601929-2"
FT   BINDING         212
FT                   /ligand="oxalate"
FT                   /ligand_id="ChEBI:CHEBI:30623"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR601929-1"
FT   BINDING         251
FT                   /ligand="Mn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29035"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR601929-2"
SQ   SEQUENCE   316 AA;  33913 MW;  3698CAB498F6A287 CRC64;
     MAPKKDKAPP PSSKPAKSGG GKQKKKKWSK GKQKEKVNNS VLFDQATYDK LLSEVPKYKQ
     ITPSVLSERL RINGSLARRA IKDLMERGLI RMVSVIWSDT IMASSILLLV VLAVLSAPLA
     LVMAGDPDIL TDYVIPANSN AGNITGDFFT FTGFRNAMSM NMSMPMPNAN FTVTKATMAE
     FPALNGQSVS YAVLMYPPGT VNPMHTHPRS AELLLLVNGA LSVGFVDTTN KLYTQDLAAG
     DMFVFPKGMV HYQFNSGNQP AMALSAFGSA AAGLVSVPVT VFGTNIDDAV LAKSFKTEVP
     TIQKLKAGLT PPPKKA
//