ID A0A0E0PDZ7_ORYRU Unreviewed; 468 AA.
AC A0A0E0PDZ7;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE RecName: Full=MBD domain-containing protein {ECO:0000259|PROSITE:PS50982};
OS Oryza rufipogon (Brownbeard rice) (Asian wild rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4529 {ECO:0000313|EnsemblPlants:ORUFI04G26780.2, ECO:0000313|Proteomes:UP000008022};
RN [1] {ECO:0000313|Proteomes:UP000008022}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. W1943 {ECO:0000313|Proteomes:UP000008022};
RA Zhao Q.;
RL Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:ORUFI04G26780.2}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR AlphaFoldDB; A0A0E0PDZ7; -.
DR STRING; 4529.A0A0E0PDZ7; -.
DR EnsemblPlants; ORUFI04G26780.2; ORUFI04G26780.2; ORUFI04G26780.
DR Gramene; ORUFI04G26780.2; ORUFI04G26780.2; ORUFI04G26780.
DR eggNOG; ENOG502R7I8; Eukaryota.
DR OMA; TARNQSH; -.
DR Proteomes; UP000008022; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd01396; MeCP2_MBD; 1.
DR InterPro; IPR016177; DNA-bd_dom_sf.
DR InterPro; IPR038945; MBD13-like.
DR InterPro; IPR001739; Methyl_CpG_DNA-bd.
DR PANTHER; PTHR34067; OS04G0193200 PROTEIN; 1.
DR PANTHER; PTHR34067:SF20; OS08G0206700 PROTEIN; 1.
DR Pfam; PF01429; MBD; 1.
DR SUPFAM; SSF54171; DNA-binding domain; 1.
DR PROSITE; PS50982; MBD; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000008022};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 32..53
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 99..178
FT /note="MBD"
FT /evidence="ECO:0000259|PROSITE:PS50982"
FT REGION 175..194
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 216..383
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 175..192
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 216..236
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 263..281
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 307..377
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 468 AA; 51154 MW; C5BD3E07065077D0 CRC64;
MASTIHHQPG GVANQIYYSY KDTVTSKPLN HIAFFLLVST VFLLLLLFFV SLLDDLDLLV
SSRLHGGSGR AVVTMDSNEG SHRITRSGIV RAKPAVTADG KIEPAGEGLP HGWLKEYRPR
KNQSGSRVKG DTFYIDPTNM YEFRSQKDVQ RYLESGDVTN CVMIQNKRKM EDLHTARNQS
HHTRRPSDHR QLDAGEGATQ CDLPIARGNS ARSDFLVNAN SSDNSEDMSS SVPKGVSEGK
LTRLKLQKAR VPNQSVEHES STGEVANMEH KPKEKKQKTK PVKQISTPLR ASPRLAALKI
NQEGNNEPKD EALSTNTDTA NQSQPKLTKS PKAKANSSVL PEKSDGAHTS NASEIPQNKY
PSATEQMQGS SVHPQQAGTA DAMPGSALSS LLRSIWSDPC LKFAIKTLAG DIPALDFIPS
QDMNKGTTPN CSSSAYDGSR NHAQVDHVGM PMPRPSDKFY GSGWFPPQ
//
