ID A0A0E0Q5F0_ORYRU Unreviewed; 549 AA.
AC A0A0E0Q5F0;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE RecName: Full=Transcription initiation factor TFIID subunit 5 {ECO:0000256|ARBA:ARBA00044130};
OS Oryza rufipogon (Brownbeard rice) (Asian wild rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4529 {ECO:0000313|EnsemblPlants:ORUFI07G06680.2, ECO:0000313|Proteomes:UP000008022};
RN [1] {ECO:0000313|Proteomes:UP000008022}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. W1943 {ECO:0000313|Proteomes:UP000008022};
RA Zhao Q.;
RL Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:ORUFI07G06680.2}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
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DR AlphaFoldDB; A0A0E0Q5F0; -.
DR EnsemblPlants; ORUFI07G06680.2; ORUFI07G06680.2; ORUFI07G06680.
DR Gramene; ORUFI07G06680.2; ORUFI07G06680.2; ORUFI07G06680.
DR HOGENOM; CLU_005884_2_1_1; -.
DR Proteomes; UP000008022; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR CDD; cd08044; TAF5_NTD2; 1.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 1.25.40.500; TFIID subunit TAF5, NTD2 domain; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR007582; TFIID_NTD2.
DR InterPro; IPR037264; TFIID_NTD2_sf.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19879:SF1; CANNONBALL-RELATED; 1.
DR PANTHER; PTHR19879; TRANSCRIPTION INITIATION FACTOR TFIID; 1.
DR Pfam; PF04494; TFIID_NTD2; 1.
DR Pfam; PF00400; WD40; 5.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 5.
DR SUPFAM; SSF160897; Taf5 N-terminal domain-like; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 3.
DR PROSITE; PS50082; WD_REPEATS_2; 5.
DR PROSITE; PS50294; WD_REPEATS_REGION; 5.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000008022};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 53..135
FT /note="TFIID subunit TAF5 NTD2"
FT /evidence="ECO:0000259|Pfam:PF04494"
FT REPEAT 294..326
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 336..377
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 378..419
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 420..461
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 462..503
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 29..49
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 196..228
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 209..226
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 549 AA; 61177 MW; 2616777B561F083C CRC64;
MEDEEMEKKR KGFRVAGLAL LEDRTRLSAT TTTTTTASSS SHSLSDAALS RSENDPARYY
DGYSKLRTWA YSYLDHYKHE LLRILYPLFF HCFMDLVAEG HTQEACSFFH TFREDHEHSR
DLKKLESILS PLHLEYSYEL LLQYLHKTQA LVVLGIINER IDFQVSPGQS PLIIDDSDAV
VLIGTSKDLT KQINQKEVHW GQRSSEGGKQ GGSHKKIKKD KFVGTTGKNM KSETSMVSIA
PRVKPELTLP MTSVEVEQSI LEDLRNPCSQ GENGPSQIER VSTSDEARKS CTLFQGHSGP
VYSAMFSPIG DFLLSSSADS TIRLWNTKLN ANLVCYKGHN YPVWDVQFSP VGHYFASASH
DRTARIWSMD KIQPLRIMAG HLSDVDCVQW HVNCNYIATG SSDKTVRLWD VQTGECIRMF
IGHRSMVLSL AMSPDGRYMA SGDEDGTIMM WDISSGRCVS PLVGHNSCVW SLAYSCEGAL
LASGSADCTV KLWDVASSTK TLKMDDTKGG SANRLRMLKA LPTKSTPVYT LQFSRRNLLF
AAGAPSLGS
//
