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Database: UniProt
Entry: A0A0E0QS44_ORYRU
LinkDB: A0A0E0QS44_ORYRU
Original site: A0A0E0QS44_ORYRU 
ID   A0A0E0QS44_ORYRU        Unreviewed;       362 AA.
AC   A0A0E0QS44;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   31-JUL-2019, entry version 27.
DE   RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};
OS   Oryza rufipogon (Brownbeard rice) (Asian wild rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=4529 {ECO:0000313|EnsemblPlants:ORUFI09G13050.1, ECO:0000313|Proteomes:UP000008022};
RN   [1] {ECO:0000313|EnsemblPlants:ORUFI09G13050.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=W1943 {ECO:0000313|EnsemblPlants:ORUFI09G13050.1};
RX   PubMed=22408737; DOI=10.1002/ece3.66;
RA   Waters D.L.E., Nock C.J., Rice N., Ishikawa R., Henry R.J.;
RT   "Chloroplast genome sequence confirms distinctness of Australian and
RT   Asian wild rice.";
RL   Ecol. Evol. 2:211-217(2012).
RN   [2] {ECO:0000313|Proteomes:UP000008022}
RP   NUCLEOTIDE SEQUENCE.
RA   Zhao Q.;
RL   Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EnsemblPlants:ORUFI09G13050.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (JUN-2015) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-
CC       ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
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DR   SMR; A0A0E0QS44; -.
DR   STRING; 4529.ORUFI09G13050.1; -.
DR   EnsemblPlants; ORUFI09G13050.1; ORUFI09G13050.1; ORUFI09G13050.
DR   Gramene; ORUFI09G13050.1; ORUFI09G13050.1; ORUFI09G13050.
DR   OMA; DDFSGHG; -.
DR   Proteomes; UP000008022; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   CDD; cd00086; homeodomain; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR017970; Homeobox_CS.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR003106; Leu_zip_homeo.
DR   Pfam; PF02183; HALZ; 1.
DR   Pfam; PF00046; Homeodomain; 1.
DR   SMART; SM00340; HALZ; 1.
DR   SMART; SM00389; HOX; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS00027; HOMEOBOX_1; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000008022};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008022}.
FT   DOMAIN      172    232       Homeobox. {ECO:0000259|PROSITE:PS50071}.
FT   DNA_BIND    174    233       Homeobox. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00108}.
FT   REGION       27    179       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   REGION      301    330       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   COILED      238    268       {ECO:0000256|SAM:Coils}.
FT   COMPBIAS     28     46       Polyampholyte. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   COMPBIAS     72     86       Pro-rich. {ECO:0000256|SAM:MobiDB-lite}.
FT   COMPBIAS    124    138       Polar. {ECO:0000256|SAM:MobiDB-lite}.
FT   COMPBIAS    163    179       Polyampholyte. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   COMPBIAS    301    322       Polar. {ECO:0000256|SAM:MobiDB-lite}.
SQ   SEQUENCE   362 AA;  37833 MW;  238AAD5A76D01FDC CRC64;
     MELGLSLGEA MADAGRELVL GLGMGRREEA AEAGRRDHEV RRELEFGSMS SRCGGSSPEP
     TVRLTLLPMV PGLGLPWPPP PPPSSESRHL EASTRGFDVN RPPSSGGGGG GGGAEEEQDD
     VAGAALSSSP NNSAGSFPMD DFSGHGLGGN DAAPGGGGGD RSCSRASDED DGGSARKKLR
     LSKEQSAFLE ESFKEHSTLN PKQKLALAKQ LNLRPRQVEV WFQNRRARTK LKQTEVDCEY
     LKRCCETLTE ENRRLQKELA ELRALKTVHP FYMHLPATTL SMCPSCERVA SNSAPATASS
     AATSSTAAPP AAPSSGGIAA TSSSAAAAAA PDHRPSSFAA LFSSPRGFPL SVAPQAQPPT
     SS
//
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