ID A0A0E0RG62_ORYRU Unreviewed; 1999 AA.
AC A0A0E0RG62;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE RecName: Full=Helicase and polymerase-containing protein TEBICHI {ECO:0008006|Google:ProtNLM};
OS Oryza rufipogon (Brownbeard rice) (Asian wild rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4529 {ECO:0000313|EnsemblPlants:ORUFI12G10050.3, ECO:0000313|Proteomes:UP000008022};
RN [1] {ECO:0000313|Proteomes:UP000008022}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. W1943 {ECO:0000313|Proteomes:UP000008022};
RA Zhao Q.;
RL Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:ORUFI12G10050.3}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
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DR EnsemblPlants; ORUFI12G10050.3; ORUFI12G10050.3; ORUFI12G10050.
DR Gramene; ORUFI12G10050.3; ORUFI12G10050.3; ORUFI12G10050.
DR HOGENOM; CLU_000818_2_0_1; -.
DR Proteomes; UP000008022; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
DR GO; GO:0006261; P:DNA-templated DNA replication; IEA:InterPro.
DR GO; GO:0050896; P:response to stimulus; IEA:UniProt.
DR CDD; cd18026; DEXHc_POLQ-like; 1.
DR CDD; cd08638; DNA_pol_A_theta; 1.
DR CDD; cd18795; SF2_C_Ski2; 1.
DR Gene3D; 1.10.3380.20; -; 1.
DR Gene3D; 3.30.70.370; -; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR001098; DNA-dir_DNA_pol_A_palm_dom.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR002298; DNA_polymerase_A.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR046931; HTH_61.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR048960; POLQ-like_helical.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR10133; DNA POLYMERASE I; 1.
DR PANTHER; PTHR10133:SF62; DNA POLYMERASE THETA; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00476; DNA_pol_A; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF20470; HTH_61; 1.
DR Pfam; PF21099; POLQ_helical; 1.
DR PRINTS; PR00868; DNAPOLI.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00482; POLAc; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF158702; Sec63 N-terminal domain-like; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000008022}.
FT DOMAIN 425..617
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 657..849
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 209..248
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1214..1233
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 213..228
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1999 AA; 220146 MW; D6343701D67F74FC CRC64;
MDVDVGHPAT AVATDEGDFE LKRFAMEFLS LSHYCSVIPS VMGGASNGEA GKQQKRSAIQ
SFLAPCSNAS AKKQRVAHSG DLEALKDVGH KTPFREKCGT QYGGPEALEE LGEGTKLSSE
GFVALQRCSF TPNTGQKRVG FSTAPGAGET PMSVSTNSLI SPGEEFWNAA IEFADGISAR
AEKGPGRPEC DADDKSSCAV ALCSKILPRS GNGGSDHENT VGSNETKQMD RSSYKEEPVA
ANNHHVNSSP LPVKHLDFFH EDEIQVPGLK IEEKGGAVDL SQKSQMKNRE NLTHSVDNVN
KSTFDMHIDS SATIHDECLS KLTTEGKNHP TRVGDSGSCL TRRDLNQLIY SEDKLLTAYS
DHGKPSKDCT NKFASQEMEA NTPTSSVPQK DHSKLSSWLP PELCAIYMKK GIPELYPWQV
ECLLVEGVLE KRNLVYCAST SAGKSFVAEI LMLRRILFSG KMAILVLPYV SICAEKAEHL
EQLLEPLGRH VRSFYGNQGG GSLPKDTSVA VCTIEKANSL VNKLLEEGRL SELGIIVIDE
LHMVGDQHRG YLLELMLTKL RYAAGEGNSE SSSGEISGSS SGKMDATHGL QIIGMSATMP
NVAAVADWLQ AALYQTEFRP VPLEEFIKVG NQVFDKDMNV VRVLPKVADL GGKDPDHIVE
LCNEVVQQGH SVLLFCSSRK GCESTARHVA KFLKVASVGS SDVGSEFPDA TFAVEALKRS
PSGLDPVLEE TLPSGVAYHH AGLTVEEREI VETCYRKGLV RVLAATSTLA AGVNLPARRV
IFRQPRIGRD FIDGTRYKQM SGRAGRTGID TKGESILVCK PEEVKRITGI LRSNCTPLES
CLSEDKNGMT HAIMEVVAGG IVQTASDIHR YVRCTLLNST KPFEDVVKSA QDSLRWLCHK
RFLEWNNETK IYSTTPLGLA AFGSSLNPEE SLVVLDDLSR AREGFVLACD LHLVYLVTPI
NVDVEPDWEL YYERFMQLTS LEQSVGNRVG VIEPFLMHMA HGAAMPVRGK PQRAGIRNRS
PTRGSGGNAL INEQALRVSK RFYVALMLSR LAQEIPVTDV CEAFKVARGM IQALQENAGR
FASMRLGWHD LEGLVAKFQN RVCFGVRAEI AELTSIPFVK GSRARALYKS GLRTPVAIAE
ASIPEIAKAL FESSTWSGQG DSGLRRMQLG IAKKIKNGAR KIVLEEAEAA RVAAFSAFKS
LGVQVPQFTT PLLPTIDEPP TRDSMVSVGR GQASDDTNNC FSYGSQRAST ERTLGNDMHP
GSSIQITESA RIVNNANIVV QVASPFSIET KLSSRNVADK GPVNAYNFPG GFDSFLDQWS
TVSEFSFDLH YVKKSIKSSS TYFDILGLAV CWENSPVYYC NFPKDLMMAG SNDSIEMWDE
LTRRWNRVIE IMRQNSVKKM TWNLKFQIQA LKYPCVSCQR LSRLHLDYKM LKNVEVLDNL
YVFLQPVSVH SGLDICLVAW VLWPDEESKT VPNLEKLVKR RLHNEAAAAA NRDGRWRNQM
HKAAHNGCCR RAAQTRALCS VLRKLLVSQN LNDLLETIEG PLVNVLADME LWGIGADMDA
CLRARHIIIR KLKELEKEAY KLAGKSFSLN ATADIADVLY THLKLPVPKG CGKGKLHPST
DKQSLDHLRD QHPIISVIKE HRTLAKLLNG TLGSICSRAQ LCSKSQRYII QGNWLQTSTA
TGRLSMEEPN LQCVEHLVDF TTLKNDHDST SMSMVDHHEI NPRDFFIPTQ ENWLLVTADY
SQIELRLMAH FSKDTALIEL LSKPDGDVFT MIASRWTGKA ESLICSKERE TTKRFIYGIL
YGMGANSLAE QLECSPEDAA QKIQSFKRFF PGVSSWLHEA VASCRHKGYV ETLMGRRRFL
SKITAGNSKE KAKAQRQAVN SICQGSAADI IKVAMIKVHS AITNGSTVGA TVDSIDVAMQ
NFSEIRGRCH LILQVHDELV LEVDPCMVAE AVRLLQTVME NSASLLGPSV SFLLLRATLN
LYKTGYIASV TESIVENED
//
