ID A0A0E3UXK4_9BACT Unreviewed; 339 AA.
AC A0A0E3UXK4;
DT 24-JUN-2015, integrated into UniProtKB/TrEMBL.
DT 24-JUN-2015, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE SubName: Full=LacI family transcriptional regulator {ECO:0000313|EMBL:AKD04342.1};
GN ORFNames=PKOR_16150 {ECO:0000313|EMBL:AKD04342.1};
OS Pontibacter korlensis.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Hymenobacteraceae;
OC Pontibacter.
OX NCBI_TaxID=400092 {ECO:0000313|EMBL:AKD04342.1, ECO:0000313|Proteomes:UP000033109};
RN [1] {ECO:0000313|EMBL:AKD04342.1, ECO:0000313|Proteomes:UP000033109}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=X14-1T {ECO:0000313|EMBL:AKD04342.1,
RC ECO:0000313|Proteomes:UP000033109};
RX PubMed=26057562; DOI=10.1038/srep10929;
RA Dai J., Dai W., Qiu C., Yang Z., Zhang Y., Zhou M., Zhang L., Fang C.,
RA Gao Q., Yang Q., Li X., Wang Z., Wang Z., Jia Z., Chen X.;
RT "Unraveling adaptation of Pontibacter korlensis to radiation and
RT infertility in desert through complete genome and comparative
RT transcriptomic analysis.";
RL Sci. Rep. 5:10929-10929(2015).
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DR EMBL; CP009621; AKD04342.1; -; Genomic_DNA.
DR RefSeq; WP_046312105.1; NZ_CP009621.1.
DR AlphaFoldDB; A0A0E3UXK4; -.
DR STRING; 400092.PKOR_16150; -.
DR KEGG; pko:PKOR_16150; -.
DR PATRIC; fig|400092.3.peg.3541; -.
DR HOGENOM; CLU_037628_6_0_10; -.
DR OrthoDB; 891936at2; -.
DR Proteomes; UP000033109; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0001216; F:DNA-binding transcription activator activity; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd06267; PBP1_LacI_sugar_binding-like; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR001761; Peripla_BP/Lac1_sug-bd_dom.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR000394; RNA_pol_sigma_54.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR PANTHER; PTHR30146:SF109; TRANSCRIPTIONAL REGULATOR LACI_GALR-LIKE SENSOR DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF00532; Peripla_BP_1; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
DR PROSITE; PS00717; SIGMA54_1; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000033109};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 6..60
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 339 AA; 38023 MW; A04329DD19223BFA CRC64;
MPGKPVTIKE IAKILSVSTS TVSRALHDHP SIGMETSQRV KQLARELNYE RNHAAVHFQK
GKTYTIGVIL PELSEAFFSS AITAIEDTAY KRNYTVLLAQ SHDDTQKEKQ LVEKMKSHRV
DGLLVSVAKT TSSFEHFSRL SQCNIPVVFF DRIPPVQDVH SVSCNLVTGT AEAVTYLLKK
GHRAIGLING PHTLFASTER REGYVKAMLN NRLKYDPSLI VECDLTETGT KAAFDSLMAS
KRKVSAIVTF NDYVWLHACK HAKELGIQLH LEFVSYANLP MIAYMDHAPL ASVEQYPYKQ
GLKATEILLD LLCTKAEQPR QAYYKVTVES QLVETQKHT
//
