GenomeNet

Database: UniProt
Entry: A0A0E3ZM89_9BURK
LinkDB: A0A0E3ZM89_9BURK
Original site: A0A0E3ZM89_9BURK 
ID   A0A0E3ZM89_9BURK        Unreviewed;       586 AA.
AC   A0A0E3ZM89;
DT   24-JUN-2015, integrated into UniProtKB/TrEMBL.
DT   24-JUN-2015, sequence version 1.
DT   24-JAN-2024, entry version 37.
DE   SubName: Full=Excinuclease ABC, C subunit {ECO:0000313|EMBL:AKD25841.1};
GN   ORFNames=CL55_00015080 {ECO:0000313|EMBL:AKD25841.1};
OS   Polynucleobacter duraquae.
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Polynucleobacter.
OX   NCBI_TaxID=1835254 {ECO:0000313|EMBL:AKD25841.1, ECO:0000313|Proteomes:UP000061135};
RN   [1] {ECO:0000313|EMBL:AKD25841.1, ECO:0000313|Proteomes:UP000061135}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MWH-MoK4 {ECO:0000313|EMBL:AKD25841.1,
RC   ECO:0000313|Proteomes:UP000061135};
RA   Hahn M.W.;
RT   "Genome of Polynucleobacter strain MWH-MoK4.";
RL   Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP007501; AKD25841.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0E3ZM89; -.
DR   STRING; 1835254.CL55_00015080; -.
DR   KEGG; pdq:CL55_00015080; -.
DR   PATRIC; fig|576611.7.peg.1534; -.
DR   HOGENOM; CLU_014841_3_0_4; -.
DR   Proteomes; UP000061135; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR   GO; GO:0009380; C:excinuclease repair complex; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0009381; F:excinuclease ABC activity; IEA:InterPro.
DR   GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR   GO; GO:0009432; P:SOS response; IEA:UniProtKB-KW.
DR   Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR   Gene3D; 3.40.1440.10; GIY-YIG endonuclease; 1.
DR   Gene3D; 4.10.860.10; UVR domain; 1.
DR   Gene3D; 3.30.420.340; UvrC, RNAse H endonuclease domain; 1.
DR   InterPro; IPR000305; GIY-YIG_endonuc.
DR   InterPro; IPR035901; GIY-YIG_endonuc_sf.
DR   InterPro; IPR003583; Hlx-hairpin-Hlx_DNA-bd_motif.
DR   InterPro; IPR010994; RuvA_2-like.
DR   InterPro; IPR001943; UVR_dom.
DR   InterPro; IPR036876; UVR_dom_sf.
DR   InterPro; IPR004791; UvrC.
DR   InterPro; IPR001162; UvrC_RNase_H_dom.
DR   InterPro; IPR038476; UvrC_RNase_H_dom_sf.
DR   NCBIfam; TIGR00194; uvrC; 1.
DR   PANTHER; PTHR30562:SF1; UVRABC SYSTEM PROTEIN C; 1.
DR   PANTHER; PTHR30562; UVRC/OXIDOREDUCTASE; 1.
DR   Pfam; PF14520; HHH_5; 1.
DR   Pfam; PF02151; UVR; 1.
DR   Pfam; PF08459; UvrC_RNaseH_dom; 1.
DR   SMART; SM00278; HhH1; 2.
DR   SUPFAM; SSF46600; C-terminal UvrC-binding domain of UvrB; 1.
DR   SUPFAM; SSF82771; GIY-YIG endonuclease; 1.
DR   SUPFAM; SSF47781; RuvA domain 2-like; 1.
DR   PROSITE; PS50164; GIY_YIG; 1.
DR   PROSITE; PS50151; UVR; 1.
DR   PROSITE; PS50165; UVRC; 1.
PE   4: Predicted;
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW   DNA excision {ECO:0000256|ARBA:ARBA00022769};
KW   DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW   Excision nuclease {ECO:0000256|ARBA:ARBA00022881};
KW   SOS response {ECO:0000256|ARBA:ARBA00023236}.
FT   DOMAIN          1..36
FT                   /note="GIY-YIG"
FT                   /evidence="ECO:0000259|PROSITE:PS50164"
FT   DOMAIN          145..180
FT                   /note="UVR"
FT                   /evidence="ECO:0000259|PROSITE:PS50151"
FT   DOMAIN          198..460
FT                   /note="UvrC family homology region profile"
FT                   /evidence="ECO:0000259|PROSITE:PS50165"
SQ   SEQUENCE   586 AA;  65014 MW;  B6374E0C6DBE6111 CRC64;
     MVGKIARYET TVTRSETEAL ILENNLIKEL APPFNILFRD DKSYPYVMLT GHQFPRLASY
     RGKTDKRNHY FGPFPNSWAV RNSVQILQKV FRLRTCEDSV FKNRSRPCLL HQIHRCSAPC
     VGRLSADQYG QDVAQATRFL EGDHGRVLSE LEKKMHAYSD AMEFEMAAVL RDRIADLSSV
     LQQQSMDTVA DGEGDVDVIA VAQMEGVVCV NLAMIRGGRH LGDRAYFPKG LRSSSGELPP
     PAEILEAFIA QHYLEEKSGD GEATTNLIPP VLILNHPLRK LVDDIAAPEE SAEDISEQSA
     PEGLHDLLNA QAGKRITFLH QPQGQRRHWL AMAEGNAKIA IAKRLVETGG QLARARALAD
     VLALELESLE QLRIECFDIS HTSGEATQAS CVVYSKNAMQ SSEYRRFNIN DITPGDDYAA
     MRQVLQRRYA NFQELPVEKM PQVILIDGGK GQVEMARQVL SEFGMDISLI VGVAKGEGRK
     VGLETLIFAD GRKSLELGID SAALLLVAQI RDEAHRFAIT GMRAKRAKAR TVSQLEEIEG
     IGAKRRQKLL ARFGGLRGVS NATIEELSSV EGISTALAEL IYRQLH
//
DBGET integrated database retrieval system