ID A0A0F2JNX2_9FIRM Unreviewed; 722 AA.
AC A0A0F2JNX2;
DT 24-JUN-2015, integrated into UniProtKB/TrEMBL.
DT 24-JUN-2015, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE SubName: Full=Transcription accessory protein (S1 RNA-binding domain) {ECO:0000313|EMBL:KJR49125.1};
GN ORFNames=UF75_0422 {ECO:0000313|EMBL:KJR49125.1};
OS Desulfosporosinus sp. I2.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Desulfitobacteriaceae;
OC Desulfosporosinus.
OX NCBI_TaxID=1617025 {ECO:0000313|EMBL:KJR49125.1, ECO:0000313|Proteomes:UP000033442};
RN [1] {ECO:0000313|EMBL:KJR49125.1, ECO:0000313|Proteomes:UP000033442}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=I2 {ECO:0000313|EMBL:KJR49125.1,
RC ECO:0000313|Proteomes:UP000033442};
RA Mardanov A.V., Karnachuk O.V., Beletsky A.V., Kadnikov V.V., Ravin N.V.;
RL Submitted (FEB-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KJR49125.1}.
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DR EMBL; JYNH01000004; KJR49125.1; -; Genomic_DNA.
DR RefSeq; WP_045572925.1; NZ_JYNH01000004.1.
DR AlphaFoldDB; A0A0F2JNX2; -.
DR PATRIC; fig|1617025.3.peg.437; -.
DR OrthoDB; 9804714at2; -.
DR Proteomes; UP000033442; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000033442}.
FT DOMAIN 644..713
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 722 AA; 80870 MW; 46AE6ED421660BF0 CRC64;
MEFNQVIAQE LGLKISQVKE AVDLLDGGNT IPFIARYRKE VTGELDENVL RDIVDRLDYL
RRLDQRKTEV MRLIDEQGKL TEELSTQIMS ATVLQDVEDL YRPYKQKRRT RATIAKEKGL
EPLAEWLLVQ YIRGDPQVEA EKYLNTELDV NSSDEALAGA MDIIAETIAD DAALRKRIRQ
ETFRIADVVA ASIAKKAKER SPFEMYYDYR EPVRKIPPHR VLALNRGEKE EFLSVKIDAP
QETLHRLLEL RYVKTGPCAP WVQKAALDAY KRLIEPSIER EVRAELSAQA EEQAIKVFAA
NLRQLLLQPP VRGKMVLGLD PGFISGCKWA VVDETGKLLK VGVIYPHPPQ KKRQEAKEIL
RKAIAEFDAN LIAIGNGTAS RETEEVVAEM IREDGISAEF ILVSEAGASV YSASKLAGDE
FPDFDLSLRS AVSIARRLQD PLAELVKIEP KAVGVGQYQH DVQPKRLEES LHGVVESCVN
VVGVDLNTAS ASLLQYVAGL KSAVAKNVVA WRDEHGKFSR RDQLKKIPRL GAQTYIQCAG
FIRLPDGVNP LENTPVHPES YELAENILKK IGHTSEDLRA RLAEVRKKLA VLEAQELASE
FDAGVPTIRD ILDALQRPGR DPREDLPRPL LRRDVTRMED LSEGMVLEGT VRNVVDFGAF
VDIGVKHDGL VHISQLCDKF IKHPMEAVAV GDIVKVRVIG IDKGRERVSL SMRDSSNPIK
PI
//
