GenomeNet

Database: UniProt
Entry: A0A0F3IFS4_9GAMM
LinkDB: A0A0F3IFS4_9GAMM
Original site: A0A0F3IFS4_9GAMM 
ID   A0A0F3IFS4_9GAMM        Unreviewed;       252 AA.
AC   A0A0F3IFS4;
DT   24-JUN-2015, integrated into UniProtKB/TrEMBL.
DT   24-JUN-2015, sequence version 1.
DT   03-MAY-2023, entry version 32.
DE   RecName: Full=superoxide dismutase {ECO:0000256|ARBA:ARBA00012682};
DE            EC=1.15.1.1 {ECO:0000256|ARBA:ARBA00012682};
GN   ORFNames=VZ94_16630 {ECO:0000313|EMBL:KJV05645.1};
OS   Methylocucumis oryzae.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Methylococcales;
OC   Methylococcaceae; Methylocucumis.
OX   NCBI_TaxID=1632867 {ECO:0000313|EMBL:KJV05645.1, ECO:0000313|Proteomes:UP000033684};
RN   [1] {ECO:0000313|Proteomes:UP000033684}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Sn10-6 {ECO:0000313|Proteomes:UP000033684};
RA   Pandit P.S., Pore S.D., Arora P., Kapse N.G., Dhakephalkar P.K.,
RA   Rahalkar M.C.;
RT   "Draft genome sequence of a novel methanotroph (Sn10-6) isolated from
RT   flooded ricefield rhizosphere in India.";
RL   Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:KJV05645.1, ECO:0000313|Proteomes:UP000033684}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Sn10-6 {ECO:0000313|EMBL:KJV05645.1,
RC   ECO:0000313|Proteomes:UP000033684};
RX   PubMed=26547566; DOI=10.1007/s00248-015-0699-z;
RA   Rahalkar M.C., Pandit P.S., Dhakephalkar P.K., Pore S., Arora P., Kapse N.;
RT   "Genome Characteristics of a Novel Type I Methanotroph (Sn10-6) Isolated
RT   from a Flooded Indian Rice Field.";
RL   Microb. Ecol. 71:519-523(2016).
CC   -!- SIMILARITY: Belongs to the iron/manganese superoxide dismutase family.
CC       {ECO:0000256|ARBA:ARBA00008714}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KJV05645.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; LAJX01000191; KJV05645.1; -; Genomic_DNA.
DR   RefSeq; WP_045780080.1; NZ_LAJX01000191.1.
DR   AlphaFoldDB; A0A0F3IFS4; -.
DR   PATRIC; fig|1632867.3.peg.2156; -.
DR   OrthoDB; 9811849at2; -.
DR   Proteomes; UP000033684; Unassembled WGS sequence.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0004784; F:superoxide dismutase activity; IEA:UniProtKB-EC.
DR   Gene3D; 3.55.40.20; Iron/manganese superoxide dismutase, C-terminal domain; 1.
DR   InterPro; IPR001189; Mn/Fe_SOD.
DR   InterPro; IPR019832; Mn/Fe_SOD_C.
DR   InterPro; IPR036324; Mn/Fe_SOD_N_sf.
DR   InterPro; IPR036314; SOD_C_sf.
DR   InterPro; IPR006311; TAT_signal.
DR   PANTHER; PTHR11404; SUPEROXIDE DISMUTASE 2; 1.
DR   PANTHER; PTHR11404:SF6; SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL; 1.
DR   Pfam; PF02777; Sod_Fe_C; 1.
DR   PIRSF; PIRSF000349; SODismutase; 1.
DR   SUPFAM; SSF54719; Fe,Mn superoxide dismutase (SOD), C-terminal domain; 1.
DR   SUPFAM; SSF46609; Fe,Mn superoxide dismutase (SOD), N-terminal domain; 1.
DR   PROSITE; PS51318; TAT; 1.
PE   3: Inferred from homology;
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW   ECO:0000256|PIRSR:PIRSR000349-1};
KW   Oxidoreductase {ECO:0000256|ARBA:ARBA00023002};
KW   Reference proteome {ECO:0000313|Proteomes:UP000033684}.
FT   DOMAIN          135..235
FT                   /note="Manganese/iron superoxide dismutase C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF02777"
FT   BINDING         70
FT                   /ligand="Mn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29035"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR000349-1"
FT   BINDING         120
FT                   /ligand="Mn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29035"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR000349-1"
FT   BINDING         202
FT                   /ligand="Mn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29035"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR000349-1"
FT   BINDING         206
FT                   /ligand="Mn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29035"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR000349-1"
SQ   SEQUENCE   252 AA;  27869 MW;  0A7FD5787038F105 CRC64;
     MTTIDRREFL TTTSGALALA AFATDTNALT STGTLMSTQP SAFSSIHERQ ALPFNPSKLD
     GLSEKLILSH WENNYGGSVK ALNTVKQKLL AMQQDANLPA FIYNDLKREH LMRTGSVVLH
     ELYFGNLGGH GKADTALQKA LTDAFGSLAT WEQEFKRMGA GLGGGSGWVV LGYNLHSGLL
     ENYWQWDHLH APSATLPLLV MDMYEHSYQM DYGAGAAQYI DAFWLNIHWD TVSTRLDKAL
     KMREVWLAGG AR
//
DBGET integrated database retrieval system