ID A0A0F3IQD3_9GAMM Unreviewed; 215 AA.
AC A0A0F3IQD3;
DT 24-JUN-2015, integrated into UniProtKB/TrEMBL.
DT 24-JUN-2015, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE RecName: Full=Tetratricopeptide repeat-like domain-containing protein {ECO:0000259|Pfam:PF09976};
GN ORFNames=VZ94_02470 {ECO:0000313|EMBL:KJV07794.1};
OS Methylocucumis oryzae.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Methylococcales;
OC Methylococcaceae; Methylocucumis.
OX NCBI_TaxID=1632867 {ECO:0000313|EMBL:KJV07794.1, ECO:0000313|Proteomes:UP000033684};
RN [1] {ECO:0000313|Proteomes:UP000033684}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Sn10-6 {ECO:0000313|Proteomes:UP000033684};
RA Pandit P.S., Pore S.D., Arora P., Kapse N.G., Dhakephalkar P.K.,
RA Rahalkar M.C.;
RT "Draft genome sequence of a novel methanotroph (Sn10-6) isolated from
RT flooded ricefield rhizosphere in India.";
RL Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KJV07794.1, ECO:0000313|Proteomes:UP000033684}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Sn10-6 {ECO:0000313|EMBL:KJV07794.1,
RC ECO:0000313|Proteomes:UP000033684};
RX PubMed=26547566; DOI=10.1007/s00248-015-0699-z;
RA Rahalkar M.C., Pandit P.S., Dhakephalkar P.K., Pore S., Arora P., Kapse N.;
RT "Genome Characteristics of a Novel Type I Methanotroph (Sn10-6) Isolated
RT from a Flooded Indian Rice Field.";
RL Microb. Ecol. 71:519-523(2016).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KJV07794.1}.
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DR EMBL; LAJX01000017; KJV07794.1; -; Genomic_DNA.
DR RefSeq; WP_045778020.1; NZ_LAJX01000017.1.
DR AlphaFoldDB; A0A0F3IQD3; -.
DR OrthoDB; 9789675at2; -.
DR Proteomes; UP000033684; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0044877; F:protein-containing complex binding; IEA:InterPro.
DR InterPro; IPR018704; TPR_21.
DR InterPro; IPR026039; YfgM.
DR PANTHER; PTHR38035:SF1; ANCILLARY SECYEG TRANSLOCON SUBUNIT; 1.
DR PANTHER; PTHR38035; UPF0070 PROTEIN YFGM; 1.
DR Pfam; PF09976; TPR_21; 1.
DR PIRSF; PIRSF006170; YfgM; 1.
PE 4: Predicted;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000033684};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 24..42
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 15..206
FT /note="Tetratricopeptide repeat-like"
FT /evidence="ECO:0000259|Pfam:PF09976"
FT REGION 183..215
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 183..202
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 215 AA; 23982 MW; 4A72ADC34DDB8393 CRC64;
MEIYDTEEEQ VAAIKAWWKE NGTAAIIGIS IGLAAIFGWD YWQDYRKAQA QQASALYDEL
VKAAKANNTD SITKIAERIA TEFSGTDYVS YSRLMLAKTK AIHNDIPGAK AVLEQLIKNG
DKELANLARI RLVRLMLANK ELEQGLKLIN EVDPATTESF AGQYDELTGD LYVALNRPDQ
ARTSYQSAQR NGNKSSVLQM KMDDLTTPEK QEATK
//