ID A0A0F4LQV6_9LACO Unreviewed; 177 AA.
AC A0A0F4LQV6;
DT 24-JUN-2015, integrated into UniProtKB/TrEMBL.
DT 24-JUN-2015, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE SubName: Full=DNA-directed DNA polymerase III epsilon subunit {ECO:0000313|EMBL:KJY61207.1};
DE SubName: Full=Exonuclease {ECO:0000313|EMBL:GGG34388.1};
GN ORFNames=GCM10007323_05420 {ECO:0000313|EMBL:GGG34388.1}, JF72_04850
GN {ECO:0000313|EMBL:KJY61207.1};
OS Lactobacillus apis.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Lactobacillus.
OX NCBI_TaxID=303541 {ECO:0000313|EMBL:KJY61207.1, ECO:0000313|Proteomes:UP000033682};
RN [1] {ECO:0000313|EMBL:KJY61207.1, ECO:0000313|Proteomes:UP000033682}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Hma11 {ECO:0000313|EMBL:KJY61207.1,
RC ECO:0000313|Proteomes:UP000033682};
RA Ellegaard K.M., Tamarit D., Javelind E., Olofsson T., Andersson S.G.,
RA Vasquez A.;
RT "Comparative genomics of the lactic acid bacteria isolated from the honey
RT bee gut.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:GGG34388.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CCM 8403 {ECO:0000313|EMBL:GGG34388.1};
RX PubMed=30832757;
RA Wu L., Ma J.;
RT "The Global Catalogue of Microorganisms (GCM) 10K type strain sequencing
RT project: providing services to taxonomists for standard genome sequencing
RT and annotation.";
RL Int. J. Syst. Evol. Microbiol. 69:895-898(2019).
RN [3] {ECO:0000313|EMBL:GGG34388.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CCM 8403 {ECO:0000313|EMBL:GGG34388.1};
RA Sun Q., Sedlacek I.;
RL Submitted (SEP-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KJY61207.1}.
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DR EMBL; BMCV01000001; GGG34388.1; -; Genomic_DNA.
DR EMBL; JXLG01000005; KJY61207.1; -; Genomic_DNA.
DR RefSeq; WP_046306542.1; NZ_PDKP01000001.1.
DR AlphaFoldDB; A0A0F4LQV6; -.
DR STRING; 303541.JF72_04850; -.
DR PATRIC; fig|303541.3.peg.635; -.
DR HOGENOM; CLU_047806_14_1_9; -.
DR OrthoDB; 9803913at2; -.
DR Proteomes; UP000033682; Unassembled WGS sequence.
DR Proteomes; UP000615279; Unassembled WGS sequence.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd06130; DNA_pol_III_epsilon_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR30231; DNA POLYMERASE III SUBUNIT EPSILON; 1.
DR PANTHER; PTHR30231:SF4; PROTEIN NEN2; 1.
DR Pfam; PF00929; RNase_T; 1.
DR SMART; SM00479; EXOIII; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW DNA-directed DNA polymerase {ECO:0000313|EMBL:KJY61207.1};
KW Exonuclease {ECO:0000313|EMBL:GGG34388.1};
KW Hydrolase {ECO:0000313|EMBL:GGG34388.1};
KW Nuclease {ECO:0000313|EMBL:GGG34388.1};
KW Nucleotidyltransferase {ECO:0000313|EMBL:KJY61207.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000033682};
KW Transferase {ECO:0000313|EMBL:KJY61207.1}.
FT DOMAIN 2..167
FT /note="Exonuclease"
FT /evidence="ECO:0000259|SMART:SM00479"
SQ SEQUENCE 177 AA; 20246 MW; E5A9441A0D1AD04B CRC64;
MNFIAMDFET ANRHPESACS LALVMVRDNQ IVDRFYTVIN PQMPFDARNI QIHDITADDV
KDAPTMAEVW TQIKDLYQPG MLVCAHNARF DTNVMKQSLA RYDIQEPHYF VIDTLQTSKL
FEPNLANHKL DTVSEALNVE LWHHHNALSD SEACAGILIA QNKEFGDEPI KNLVYQI
//
