ID   A0A0F4QES6_9GAMM        Unreviewed;       778 AA.
AC   A0A0F4QES6;
DT   24-JUN-2015, integrated into UniProtKB/TrEMBL.
DT   24-JUN-2015, sequence version 1.
DT   27-MAR-2024, entry version 30.
DE   SubName: Full=Transcription accessory protein {ECO:0000313|EMBL:KJZ05729.1};
GN   ORFNames=TW77_21730 {ECO:0000313|EMBL:KJZ05729.1};
OS   Pseudoalteromonas rubra.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC   Pseudoalteromonadaceae; Pseudoalteromonas.
OX   NCBI_TaxID=43658 {ECO:0000313|EMBL:KJZ05729.1, ECO:0000313|Proteomes:UP000033452};
RN   [1] {ECO:0000313|EMBL:KJZ05729.1, ECO:0000313|Proteomes:UP000033452}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=S2471 {ECO:0000313|EMBL:KJZ05729.1,
RC   ECO:0000313|Proteomes:UP000033452};
RX   PubMed=25879706; DOI=10.1186/s12864-015-1365-z;
RA   Machado H., Sonnenschein E.C., Melchiorsen J., Gram L.;
RT   "Genome mining reveals unlocked bioactive potential of marine Gram-negative
RT   bacteria.";
RL   BMC Genomics 16:158-158(2015).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KJZ05729.1}.
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DR   EMBL; JXYA01000063; KJZ05729.1; -; Genomic_DNA.
DR   RefSeq; WP_046007057.1; NZ_JXYA01000063.1.
DR   AlphaFoldDB; A0A0F4QES6; -.
DR   PATRIC; fig|43658.5.peg.4578; -.
DR   OrthoDB; 9804714at2; -.
DR   Proteomes; UP000033452; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR   CDD; cd05685; S1_Tex; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR   Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR   Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR   Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR   InterPro; IPR041692; HHH_9.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR010994; RuvA_2-like.
DR   InterPro; IPR003029; S1_domain.
DR   InterPro; IPR044146; S1_Tex.
DR   InterPro; IPR023323; Tex-like_dom_sf.
DR   InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR   InterPro; IPR018974; Tex-like_N.
DR   InterPro; IPR032639; Tex_YqgF.
DR   InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR   InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR   PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR   PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR   Pfam; PF12836; HHH_3; 1.
DR   Pfam; PF17674; HHH_9; 1.
DR   Pfam; PF00575; S1; 1.
DR   Pfam; PF09371; Tex_N; 1.
DR   Pfam; PF16921; Tex_YqgF; 1.
DR   SMART; SM00316; S1; 1.
DR   SMART; SM00732; YqgFc; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR   SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR   PROSITE; PS50126; S1; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000033452}.
FT   DOMAIN          649..718
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   REGION          722..767
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        744..760
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   778 AA;  84959 MW;  46F05A5197055611 CRC64;
     MSNISARLAA ELNASQQQVN AATALLDEGA TVPFIARYRK EVTGGLDDTQ LRLLEQRLGY
     LRELEERRAF IIKTIDEQGK LTEQLASELN QVQSKTELED LYLPYKPKRR TKGQIAIEAG
     LEPLADLLFS DPNQTPELAA EAFINADKGI EDCKAALDGA KFILMERFSE DAKLLGKFRN
     QLKQHGYLQS RVVPGQEEAG SKYRDYFEHD EKLAGVPSHR ALAMLRARNE GILQLSINPE
     PQAEDPQQYC AQMIADHYGL DVSGSAASGW LMTVVQWAWK IKLATHLENE MLGATRENAE
     QGAIDVFAKN LKDLLMAAPA GPRVTMGIDP GLRTGCKIAV VDKTGKLLAT STIYPHAPQN
     HWDKSLRTLE QQCRQHKVEL IAIGNGTASR ETDKLAAELL KAACELKLTK VMVSEAGASV
     YSASEFAANE FPDLDVSLRG AVSIARRLQD PLAELVKIEP KSIGVGQYQH DVSQSQLGQT
     LTTVVEDCVN SVGVDVNTAS VPLLTRVSGL NKTLASNIVK FRDTNGSFSN RKQLKQVERL
     GPKAFEQAAG FLRIANGDDP LDASAVHPEA YPAVKKICTS KSLDVTALIG NSDVLSKLDP
     AEYVDDKFGV PTITDILGEL DKPGRDPRPE FKTAQFKAGV EAIADLKVGM TLEGVVSNVA
     NFGAFVDVGV HQDGLVHISA LTDKFISDPR EVVKAGDIVK VKVIEVDVAR KRISFTMRLN
     DEIPANTGQK QNKPAAQKPG GKPQRPAQRK DSRRDNRRDN GNAAMGNAFA EAFAKLKK
//