ID A0A0F4RHC7_9RHOB Unreviewed; 193 AA.
AC A0A0F4RHC7;
DT 24-JUN-2015, integrated into UniProtKB/TrEMBL.
DT 24-JUN-2015, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:KJZ19386.1};
GN ORFNames=TW80_11530 {ECO:0000313|EMBL:KJZ19386.1};
OS Loktanella sp. S4079.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Loktanella.
OX NCBI_TaxID=579483 {ECO:0000313|EMBL:KJZ19386.1, ECO:0000313|Proteomes:UP000033741};
RN [1] {ECO:0000313|EMBL:KJZ19386.1, ECO:0000313|Proteomes:UP000033741}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S4079 {ECO:0000313|EMBL:KJZ19386.1,
RC ECO:0000313|Proteomes:UP000033741};
RX PubMed=25879706; DOI=10.1186/s12864-015-1365-z;
RA Machado H., Sonnenschein E.C., Melchiorsen J., Gram L.;
RT "Genome mining reveals unlocked bioactive potential of marine Gram-negative
RT bacteria.";
RL BMC Genomics 16:158-158(2015).
CC -!- PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004752}.
CC -!- SIMILARITY: Belongs to the YkuD family.
CC {ECO:0000256|ARBA:ARBA00005992}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KJZ19386.1}.
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DR EMBL; JXYE01000003; KJZ19386.1; -; Genomic_DNA.
DR RefSeq; WP_045997526.1; NZ_JXYE01000003.1.
DR AlphaFoldDB; A0A0F4RHC7; -.
DR STRING; 579483.TW80_11530; -.
DR PATRIC; fig|579483.3.peg.2362; -.
DR OrthoDB; 9795305at2; -.
DR UniPathway; UPA00219; -.
DR Proteomes; UP000033741; Unassembled WGS sequence.
DR GO; GO:0004180; F:carboxypeptidase activity; IEA:UniProt.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-UniPathway.
DR CDD; cd16913; YkuD_like; 1.
DR Gene3D; 2.40.440.10; L,D-transpeptidase catalytic domain-like; 1.
DR InterPro; IPR005490; LD_TPept_cat_dom.
DR InterPro; IPR006311; TAT_signal.
DR InterPro; IPR019546; TAT_signal_bac_arc.
DR InterPro; IPR038063; Transpep_catalytic_dom.
DR NCBIfam; TIGR01409; TAT_signal_seq; 1.
DR PANTHER; PTHR30582; L,D-TRANSPEPTIDASE; 1.
DR PANTHER; PTHR30582:SF24; L,D-TRANSPEPTIDASE ERFK_SRFK-RELATED; 1.
DR Pfam; PF03734; YkuD; 1.
DR SUPFAM; SSF141523; L,D-transpeptidase catalytic domain-like; 1.
DR PROSITE; PS51318; TAT; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Reference proteome {ECO:0000313|Proteomes:UP000033741};
KW Signal {ECO:0000256|SAM:SignalP};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT SIGNAL 1..24
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 25..193
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002476706"
FT DOMAIN 63..191
FT /note="L,D-transpeptidase catalytic"
FT /evidence="ECO:0000259|Pfam:PF03734"
SQ SEQUENCE 193 AA; 21580 MW; C58FD5CDEF5D1E54 CRC64;
MTKVMSRRGF LAASAAVVGT GAAAQTANTT EIESDISSRV QRNISSFRSL DWQPYFSNLN
NGAILVDIQS RALHYWSEDQ SIYKLYPTSV PLTDDLTRTG RTEVTRKVEG PSWAPTPAMR
IRNPEWPDFI GPGPDNPLGT HALYLSWQYY RIHGTHDTRK IGRRSSNGCI GLYNEQIAQL
FSYAKVGTQV LLI
//
