ID A0A0F4RJM1_9RHOB Unreviewed; 345 AA.
AC A0A0F4RJM1;
DT 24-JUN-2015, integrated into UniProtKB/TrEMBL.
DT 24-JUN-2015, sequence version 1.
DT 24-JAN-2024, entry version 35.
DE SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:KJZ18942.1};
GN ORFNames=TW80_12780 {ECO:0000313|EMBL:KJZ18942.1};
OS Loktanella sp. S4079.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Loktanella.
OX NCBI_TaxID=579483 {ECO:0000313|EMBL:KJZ18942.1, ECO:0000313|Proteomes:UP000033741};
RN [1] {ECO:0000313|EMBL:KJZ18942.1, ECO:0000313|Proteomes:UP000033741}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S4079 {ECO:0000313|EMBL:KJZ18942.1,
RC ECO:0000313|Proteomes:UP000033741};
RX PubMed=25879706; DOI=10.1186/s12864-015-1365-z;
RA Machado H., Sonnenschein E.C., Melchiorsen J., Gram L.;
RT "Genome mining reveals unlocked bioactive potential of marine Gram-negative
RT bacteria.";
RL BMC Genomics 16:158-158(2015).
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000256|ARBA:ARBA00004418}.
CC -!- SIMILARITY: Belongs to the bacterial solute-binding protein 2 family.
CC {ECO:0000256|ARBA:ARBA00007639}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KJZ18942.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; JXYE01000004; KJZ18942.1; -; Genomic_DNA.
DR RefSeq; WP_045997821.1; NZ_JXYE01000004.1.
DR AlphaFoldDB; A0A0F4RJM1; -.
DR STRING; 579483.TW80_12780; -.
DR PATRIC; fig|579483.3.peg.2616; -.
DR OrthoDB; 60111at2; -.
DR Proteomes; UP000033741; Unassembled WGS sequence.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProt.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd20009; PBP1_RafR-like; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR025997; SBP_2_dom.
DR PANTHER; PTHR30146:SF109; ARABINOSE METABOLISM TRANSCRIPTIONAL REPRESSOR; 1.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13407; Peripla_BP_4; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000033741};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 21..75
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 345 AA; 37604 MW; A8140FC26689E1CD CRC64;
MPRNKTLPET SADVRPEGGK PTLKTIARIS GLAVPTVSRA LNDAPDIGTE TKKLIRKIAN
EIGYVPNRAG VRLRTGRTNV ISLVMSTEHD TMSHTARLIS SVAGGLRDTP FHLVVTPFFP
DQDPLEPVRY IVETGSADAV IINQIRPQDP RIAYLMERGF PFATHGRSEW AERHAYYDFD
NSAFGQLAVR KLASRGRKKL LLIAPPTAQS YAQHVIFGTR QAASECNVEI MLADPVTSDS
YISEIVTYVS DTLAKYNDID GIITASTSSA MAAVAGLEQR GAKVGKDIDV YTKEAMPFLN
LFRADILTTA EQVGAAGEFL AKAAIQAIRS PTAKPMQHLE VPSER
//