ID A0A0F5R240_9BACL Unreviewed; 651 AA.
AC A0A0F5R240;
DT 24-JUN-2015, integrated into UniProtKB/TrEMBL.
DT 24-JUN-2015, sequence version 1.
DT 24-JAN-2024, entry version 22.
DE SubName: Full=Stage V sporulation protein D {ECO:0000313|EMBL:KKC47011.1};
GN ORFNames=VE23_07440 {ECO:0000313|EMBL:KKC47011.1};
OS Paenibacillus sp. D9.
OC Bacteria; Bacillota; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.
OX NCBI_TaxID=665792 {ECO:0000313|EMBL:KKC47011.1, ECO:0000313|Proteomes:UP000036611};
RN [1] {ECO:0000313|EMBL:KKC47011.1, ECO:0000313|Proteomes:UP000036611}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=D9 {ECO:0000313|EMBL:KKC47011.1,
RC ECO:0000313|Proteomes:UP000036611};
RA Sharma V., Lin J.;
RT "Genome sequence of surfactant producing, diesel degrading Paenibacillus
RT sp. D9, isolated from diesel contaminated soil.";
RL Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the transpeptidase family.
CC {ECO:0000256|ARBA:ARBA00007171}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KKC47011.1}.
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DR EMBL; JZEJ01000001; KKC47011.1; -; Genomic_DNA.
DR RefSeq; WP_048749504.1; NZ_JZEJ01000001.1.
DR AlphaFoldDB; A0A0F5R240; -.
DR PATRIC; fig|665792.3.peg.1662; -.
DR OrthoDB; 9804124at2; -.
DR Proteomes; UP000036611; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008658; F:penicillin binding; IEA:InterPro.
DR CDD; cd06573; PASTA; 1.
DR Gene3D; 3.30.10.20; -; 1.
DR Gene3D; 3.30.450.330; -; 1.
DR Gene3D; 3.40.710.10; DD-peptidase/beta-lactamase superfamily; 1.
DR Gene3D; 3.90.1310.10; Penicillin-binding protein 2a (Domain 2); 1.
DR InterPro; IPR012338; Beta-lactam/transpept-like.
DR InterPro; IPR005543; PASTA_dom.
DR InterPro; IPR005311; PBP_dimer.
DR InterPro; IPR036138; PBP_dimer_sf.
DR InterPro; IPR001460; PCN-bd_Tpept.
DR InterPro; IPR011927; SpoVD_pbp.
DR NCBIfam; TIGR02214; spoVD_pbp; 1.
DR PANTHER; PTHR30627; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE; 1.
DR PANTHER; PTHR30627:SF19; STAGE V SPORULATION PROTEIN D; 1.
DR Pfam; PF03793; PASTA; 1.
DR Pfam; PF03717; PBP_dimer; 1.
DR Pfam; PF00905; Transpeptidase; 1.
DR SMART; SM00740; PASTA; 1.
DR SUPFAM; SSF56601; beta-lactamase/transpeptidase-like; 1.
DR SUPFAM; SSF56519; Penicillin binding protein dimerisation domain; 1.
DR SUPFAM; SSF54184; Penicillin-binding protein 2x (pbp-2x), c-terminal domain; 1.
DR PROSITE; PS51178; PASTA; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000036611};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..32
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 578..637
FT /note="PASTA"
FT /evidence="ECO:0000259|PROSITE:PS51178"
SQ SEQUENCE 651 AA; 69729 MW; 047BA68D3EA1DD70 CRC64;
MKVSNVTLRR RLFLALVVVL VGFVALIARL GYVQLVRGGE LSAKAEDNWR REVAFAPNRG
DITDRNGTKL AYNVSSPTIV AIPVQIKDKE GTAKTLAPVL GISETKLLGL LKKKAMSVII
KPEGLKISLD KALEIKKLGL PGIVVAEDNK RYYPFGELAA SVLGITGVDG GLTGIEKKYD
DKLKGVKGSI SYLSDAKGEM MPGSTDRYQA PTDGLNLELT IDKQIQTIME RELDQAMTKY
KANDAIAIAM DPNTGEVLGM ASRPTFEPGN YNAYPAEVYN RILPIWMTYE PGSTFKIITL
SAALEEGKVN LKNEHFFDPG AVEIGGARLR CWKKGGHGSQ TFLEVVQNSC NPGFVALGNR
LGKDTLFKYI KDFGFGKKTG IDLGGEENGI LFKLSQVGPV ELATTAFGQG VSVTPIQQIA
AVSAAVNGGT LYEPHLAKAW TNPETGKVVQ EIQPEPVRKV ISEKTSAQVR EALESVVALG
TGGNAFIDGY RVGGKTGTAQ KVINGRYSPN EHIVSFIGVA PADNPKIVVY VAVDNPQGIQ
FGGVVAAPIV RNILEDSLQY MGVPKSSAQI GKKYKYGETP IVTVPNLVGK TVSDIYEDMN
MNFNLSSAGS GNTVIRQAPA AGARVDKGST IRIYLGSDAD LPGDADAHAD H
//
