ID A0A0F7LYC7_9GAMM Unreviewed; 405 AA.
AC A0A0F7LYC7;
DT 22-JUL-2015, integrated into UniProtKB/TrEMBL.
DT 22-JUL-2015, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=Integrase {ECO:0000313|EMBL:AKH67711.1};
GN ORFNames=IMCC21906_00016 {ECO:0000313|EMBL:AKH67711.1};
OS Spongiibacter sp. IMCC21906.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Cellvibrionales;
OC Spongiibacteraceae; Spongiibacter.
OX NCBI_TaxID=1620392 {ECO:0000313|EMBL:AKH67711.1, ECO:0000313|Proteomes:UP000035013};
RN [1] {ECO:0000313|EMBL:AKH67711.1, ECO:0000313|Proteomes:UP000035013}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IMCC21906 {ECO:0000313|EMBL:AKH67711.1,
RC ECO:0000313|Proteomes:UP000035013};
RA Cho J.-C., Yang S.-J., Kang I.;
RT "Complete genome sequence of IMCC21906 belonging to the
RT Gammaproteobacteria.";
RL Submitted (MAY-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the 'phage' integrase family.
CC {ECO:0000256|ARBA:ARBA00008857}.
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DR EMBL; CP011477; AKH67711.1; -; Genomic_DNA.
DR RefSeq; WP_047010446.1; NZ_CP011477.1.
DR AlphaFoldDB; A0A0F7LYC7; -.
DR STRING; 1620392.IMCC21906_00016; -.
DR KEGG; spoi:IMCC21906_00016; -.
DR PATRIC; fig|1620392.3.peg.21; -.
DR OrthoDB; 9795573at2; -.
DR Proteomes; UP000035013; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0015074; P:DNA integration; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0075713; P:establishment of integrated proviral latency; IEA:UniProtKB-KW.
DR GO; GO:0046718; P:viral entry into host cell; IEA:UniProtKB-KW.
DR GO; GO:0044826; P:viral genome integration into host DNA; IEA:UniProtKB-KW.
DR CDD; cd00801; INT_P4_C; 1.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 3.30.160.390; Integrase, DNA-binding domain; 1.
DR Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR InterPro; IPR044068; CB.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR038488; Integrase_DNA-bd_sf.
DR InterPro; IPR025166; Integrase_DNA_bind_dom.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR InterPro; IPR004107; Integrase_SAM-like_N.
DR PANTHER; PTHR30629; PROPHAGE INTEGRASE; 1.
DR PANTHER; PTHR30629:SF2; PROPHAGE INTEGRASE INTS-RELATED; 1.
DR Pfam; PF13356; Arm-DNA-bind_3; 1.
DR Pfam; PF14659; Phage_int_SAM_3; 1.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR PROSITE; PS51900; CB; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 3: Inferred from homology;
KW DNA integration {ECO:0000256|ARBA:ARBA00022908};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU01248}; Reference proteome {ECO:0000313|Proteomes:UP000035013};
KW Viral genome integration {ECO:0000256|ARBA:ARBA00023195};
KW Virus entry into host cell {ECO:0000256|ARBA:ARBA00023296}.
FT DOMAIN 98..179
FT /note="Core-binding (CB)"
FT /evidence="ECO:0000259|PROSITE:PS51900"
FT DOMAIN 202..380
FT /note="Tyr recombinase"
FT /evidence="ECO:0000259|PROSITE:PS51898"
SQ SEQUENCE 405 AA; 45751 MW; 8F6B533F5DC277D4 CRC64;
MPLTDPAVKL AKPKDKPYRL TDGEGMYLEV SPKGGKYWRM KYRFGGKEKR LSIGVYPTTS
LKKARQLREQ ARRQLSDGID PSALKQITKL VSSTAAANSF KVVALEWFAK QKPTWAESHW
SKVDRMMERD LFPYLGTRPL NEITPPELLA VLRKIESRGA LESAKRTKQI AGQIFRYGVA
TGRCERDPAQ DLNGALATPV KKHFAAITEP KAVGALLNAL EGYQGTAVVR AALRIAPLTF
VRPGELRKAK WAEIDFDKAE WRYFVTKTKS EHIVPLSTQA IDILRELQPL TCRSEYVFPS
ARTLSRPMSN NAVLSAMRRM GIDKDEMCGH GFRAMARTIL DEELQFRPDW IEHQLAHAVK
DVHGRAYNRT AHLTERKKMM QAWANYLDNL KAQAANNNVI AANFG
//
