GenomeNet

Database: UniProt
Entry: A0A0F7M4H6_9GAMM
LinkDB: A0A0F7M4H6_9GAMM
Original site: A0A0F7M4H6_9GAMM 
ID   A0A0F7M4H6_9GAMM        Unreviewed;       558 AA.
AC   A0A0F7M4H6;
DT   22-JUL-2015, integrated into UniProtKB/TrEMBL.
DT   22-JUL-2015, sequence version 1.
DT   24-JAN-2024, entry version 24.
DE   RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN   ORFNames=IMCC21906_02395 {ECO:0000313|EMBL:AKH70051.1};
OS   Spongiibacter sp. IMCC21906.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Cellvibrionales;
OC   Spongiibacteraceae; Spongiibacter.
OX   NCBI_TaxID=1620392 {ECO:0000313|EMBL:AKH70051.1, ECO:0000313|Proteomes:UP000035013};
RN   [1] {ECO:0000313|EMBL:AKH70051.1, ECO:0000313|Proteomes:UP000035013}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=IMCC21906 {ECO:0000313|EMBL:AKH70051.1,
RC   ECO:0000313|Proteomes:UP000035013};
RA   Cho J.-C., Yang S.-J., Kang I.;
RT   "Complete genome sequence of IMCC21906 belonging to the
RT   Gammaproteobacteria.";
RL   Submitted (MAY-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC       point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC       purine-rich sequence. {ECO:0000256|PIRNR:PIRNR002111}.
CC   -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC       {ECO:0000256|ARBA:ARBA00006767, ECO:0000256|PIRNR:PIRNR002111}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP011477; AKH70051.1; -; Genomic_DNA.
DR   RefSeq; WP_047012336.1; NZ_CP011477.1.
DR   AlphaFoldDB; A0A0F7M4H6; -.
DR   STRING; 1620392.IMCC21906_02395; -.
DR   KEGG; spoi:IMCC21906_02395; -.
DR   PATRIC; fig|1620392.3.peg.2491; -.
DR   OrthoDB; 9804077at2; -.
DR   Proteomes; UP000035013; Chromosome.
DR   GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:InterPro.
DR   CDD; cd05687; S1_RPS1_repeat_ec1_hs1; 1.
DR   CDD; cd04465; S1_RPS1_repeat_ec2_hs2; 1.
DR   CDD; cd05688; S1_RPS1_repeat_ec3; 1.
DR   CDD; cd05689; S1_RPS1_repeat_ec4; 1.
DR   CDD; cd05691; S1_RPS1_repeat_ec6; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 6.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR000110; Ribosomal_bS1.
DR   InterPro; IPR035104; Ribosomal_protein_S1-like.
DR   InterPro; IPR003029; S1_domain.
DR   NCBIfam; TIGR00717; rpsA; 1.
DR   PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR   PANTHER; PTHR10724:SF7; 30S RIBOSOMAL PROTEIN S1, CHLOROPLASTIC; 1.
DR   Pfam; PF00575; S1; 6.
DR   PIRSF; PIRSF002111; RpsA; 1.
DR   PRINTS; PR00681; RIBOSOMALS1.
DR   SMART; SM00316; S1; 6.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 6.
DR   PROSITE; PS50126; S1; 6.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000035013};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW   Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW   ECO:0000313|EMBL:AKH70051.1}; RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT   DOMAIN          21..87
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   DOMAIN          105..171
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   DOMAIN          192..260
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   DOMAIN          277..347
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   DOMAIN          364..434
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   DOMAIN          451..520
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
SQ   SEQUENCE   558 AA;  61805 MW;  001B33837F4F5474 CRC64;
     MSESFAELFE ESLKTIDMKP GSIVTGVVID IDSDWVTVHA GLKSEGVIPR DQFFSESGEF
     SLQIGDEVQV ALESVEDGFG ETKLSREKAK RAEAWTSLEA AYEAEETVTG IINGKVKGGF
     TVDINSIRAF LPGSLVDVRP VRDTAHLEGK ELEFKVIKLD QKRNNVVVSR RAVLESVNSE
     EREALLESLQ EGMVVKGIVK NLTDYGAFVD LGGIDGLLHI TDMAWKRIKH PSEIVNVGDE
     IDVRILKFDR ERNRVSLGLK QLGEDPWVAI KTRYPENSRV KAKVTNLTDY GCFAEIEEGV
     EGLVHVSEMD WTNKNIHPSK VVQVGDEVEV MILDIDEERR RISLGIKQCQ QNPWDAFGSQ
     YTKGDKISGG IKSITDFGIF IGLDGNIDGL VHLSDISWNE TGEEAVRNFK KGDEIETVIL
     SIDPERERIS LGIKQLEDDP FSNYVAINDK GSIVTGTVKE VDAKSAVIVL AEEVEGVLKA
     SEISRDKVED ARNVLKEGEE VEVKIISVDR KNRGLTLSIK AKDMADEKEA VKSLRENQSE
     AAATTIGDLI KAQMENKD
//
DBGET integrated database retrieval system