ID A0A0G0SD12_9BACT Unreviewed; 402 AA.
AC A0A0G0SD12;
DT 22-JUL-2015, integrated into UniProtKB/TrEMBL.
DT 22-JUL-2015, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=RNA polymerase sigma factor {ECO:0000313|EMBL:KKR62739.1};
GN ORFNames=UU01_C0003G0019 {ECO:0000313|EMBL:KKR62739.1};
OS Parcubacteria group bacterium GW2011_GWA2_40_37.
OC Bacteria.
OX NCBI_TaxID=1618817 {ECO:0000313|EMBL:KKR62739.1, ECO:0000313|Proteomes:UP000034813};
RN [1] {ECO:0000313|EMBL:KKR62739.1, ECO:0000313|Proteomes:UP000034813}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Brown C.T., Hug L.A., Thomas B.C., Sharon I., Castelle C.J., Singh A.,
RA Wilkins M.J., Williams K.H., Banfield J.F.;
RT "rRNA introns, odd ribosomes, and small enigmatic genomes across a large
RT radiation of phyla.";
RL Nature 0:0-0(2015).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KKR62739.1}.
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DR EMBL; LBYZ01000003; KKR62739.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0G0SD12; -.
DR PATRIC; fig|1618817.3.peg.178; -.
DR Proteomes; UP000034813; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.20.120.1810; -; 1.
DR Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR Gene3D; 1.10.220.120; Sigma-70 factor, region 1.1; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR000943; RNA_pol_sigma70.
DR InterPro; IPR009042; RNA_pol_sigma70_r1_2.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR007624; RNA_pol_sigma70_r3.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR007127; RNA_pol_sigma_70_r1_1.
DR InterPro; IPR042189; RNA_pol_sigma_70_r1_1_sf.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR30603; RNA POLYMERASE SIGMA FACTOR RPO; 1.
DR PANTHER; PTHR30603:SF47; RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC; 1.
DR Pfam; PF03979; Sigma70_r1_1; 1.
DR Pfam; PF00140; Sigma70_r1_2; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF04539; Sigma70_r3; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR PRINTS; PR00046; SIGMA70FCT.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 2.
DR PROSITE; PS00715; SIGMA70_1; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 192..205
FT /note="RNA polymerase sigma-70"
FT /evidence="ECO:0000259|PROSITE:PS00715"
FT REGION 1..23
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 402 AA; 46742 MW; 1662230579112FFC CRC64;
MKTTKKTKKV STKIRKHKMA KKPKSKKLKI KKLKISKKFP LKLAFLEKKA ENLTRISSEL
IEKGRKRGFI TYDEILKTFP DIENNILFLD ELYEKFAIAG IDVLEGGNLL NLNVDLTDKD
LNKSTMHDSI QMYLKEIGQY PLIHAGEEKE LARRIEHGDL EAKNLLARAN LRLVVSIAKK
YVGRSANLTL LDLIQEGNLG LFKAVEKFDW TKGYKFSTYA TWWIRQSITR ALADQSRTIR
IPVHMVETIS KYKQTHRRLS QDLGREPLAE EIATEMGIPV EKIHIIENIS QETVSLEQPV
GDDDDKSTLE NFIPDDKILR PDQESSRRIL SDQIREVLCE LNPKERKILE MRYGLLDGIQ
HTLERVGEEF GVTRERIRQI EVKVHEKLRQ HDKISRLKNY FD
//
