ID A0A0G2FR40_9PEZI Unreviewed; 397 AA.
AC A0A0G2FR40;
DT 22-JUL-2015, integrated into UniProtKB/TrEMBL.
DT 22-JUL-2015, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE RecName: Full=Pre-rRNA-processing protein IPI3 {ECO:0000256|RuleBase:RU369067};
GN ORFNames=UCDDA912_g03563 {ECO:0000313|EMBL:KKY36444.1};
OS Diaporthe ampelina.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Sordariomycetidae; Diaporthales; Diaporthaceae; Diaporthe.
OX NCBI_TaxID=1214573 {ECO:0000313|EMBL:KKY36444.1, ECO:0000313|Proteomes:UP000034680};
RN [1] {ECO:0000313|EMBL:KKY36444.1, ECO:0000313|Proteomes:UP000034680}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DA912 {ECO:0000313|EMBL:KKY36444.1};
RA Lawrence D.P., Travadon R., Rolshausen P.E., Baumgartner K.;
RT "Distinctive expansion of gene families associated with plant cell wall
RT degradation and secondary metabolism in the genomes of grapevine trunk
RT pathogens.";
RL Submitted (MAY-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KKY36444.1, ECO:0000313|Proteomes:UP000034680}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DA912 {ECO:0000313|EMBL:KKY36444.1};
RA Morales-Cruz A., Amrine K.C., Cantu D.;
RL Submitted (MAY-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of the RIX1 complex required for processing of ITS2
CC sequences from 35S pre-rRNA. {ECO:0000256|ARBA:ARBA00002355,
CC ECO:0000256|RuleBase:RU369067}.
CC -!- SUBUNIT: Component of the RIX1 complex, composed of IPI1, RIX1/IPI2 and
CC IPI3 in a 1:2:2 stoichiometry. The complex interacts (via RIX1) with
CC MDN1 (via its hexameric AAA ATPase ring) and the pre-60S ribosome
CC particles. {ECO:0000256|RuleBase:RU369067}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU369067}.
CC -!- SIMILARITY: Belongs to the WD repeat IPI3/WDR18 family.
CC {ECO:0000256|ARBA:ARBA00010143, ECO:0000256|RuleBase:RU369067}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KKY36444.1}.
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DR EMBL; LCUC01000119; KKY36444.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0G2FR40; -.
DR STRING; 1214573.A0A0G2FR40; -.
DR OrthoDB; 21962at2759; -.
DR Proteomes; UP000034680; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0097344; C:Rix1 complex; IEA:UniProtKB-UniRule.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-UniRule.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR InterPro; IPR045227; WDR18/Ipi3/RID3.
DR PANTHER; PTHR18763:SF0; WD REPEAT-CONTAINING PROTEIN 18; 1.
DR PANTHER; PTHR18763; WD-REPEAT PROTEIN 18; 1.
DR Pfam; PF00400; WD40; 2.
DR SMART; SM00320; WD40; 3.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|RuleBase:RU369067};
KW Reference proteome {ECO:0000313|Proteomes:UP000034680};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW rRNA processing {ECO:0000256|RuleBase:RU369067};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|RuleBase:RU369067}.
SQ SEQUENCE 397 AA; 43128 MW; 893BBB942738C676 CRC64;
MLAEEFLSSI CGPPLSSNTA IAKDVGIYTH SLWPTFAAKS AFKKSQTPPN CLAASETHVF
SAQHEKAYVH VYSRLRGNQE AFVALPERIR CLTLANDVLI LGTVEGRIML WETCTGRLVS
LPPCHVQAVS CVVATPYHLL TGSDDSNIHV WSLAHLLELD SNEEREPVVS FSNHRGAITA
IASSSGDSEG TSICVSASKD KTCIIWNYRT GVFVSTENGS IFSVEFFGPK PLLGPKKSGA
ASCLGLTYDG TVLLSGHPKG QIHAWGISDK QASNGAKELT NLNAAVTNII LDPPLSHGSR
PTRAWNIVKP SQIQRAYTFT AQFEADLRSE TRFHAMLKTP GFSDETLENA ISTFLHTADE
NTSDQASRGL DEQLEIFRQQ ESSSRDTIYP LTSAKAT
//
