ID A0A0G2K414_RAT Unreviewed; 544 AA.
AC A0A0G2K414;
DT 22-JUL-2015, integrated into UniProtKB/TrEMBL.
DT 25-MAY-2022, sequence version 2.
DT 27-MAR-2024, entry version 37.
DE SubName: Full=Coiled-coil domain containing 144B {ECO:0000313|Ensembl:ENSRNOP00000072862.2};
GN Name=Ccdc144b {ECO:0000313|Ensembl:ENSRNOP00000072862.2,
GN ECO:0000313|RGD:1585492};
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116 {ECO:0000313|Ensembl:ENSRNOP00000072862.2, ECO:0000313|Proteomes:UP000002494};
RN [1] {ECO:0000313|Ensembl:ENSRNOP00000072862.2, ECO:0000313|Proteomes:UP000002494}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000072862.2,
RC ECO:0000313|Proteomes:UP000002494};
RX PubMed=15057822; DOI=10.1038/nature02426;
RG Rat Genome Sequencing Project Consortium;
RA Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J.,
RA Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G.,
RA Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G.,
RA Morgan M., Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G.,
RA Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S.,
RA Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T.,
RA Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D.,
RA Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L.,
RA Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D.,
RA Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M.,
RA Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C.,
RA Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J.,
RA Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H.,
RA Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X.,
RA Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q.,
RA Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P.,
RA Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A.,
RA Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C.,
RA Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J.,
RA Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J.,
RA Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F.,
RA Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A.,
RA Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A.,
RA Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J.,
RA Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E.,
RA Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M.,
RA Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C.,
RA Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L.,
RA Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W.,
RA Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y.,
RA Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V.,
RA Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M.,
RA Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S.,
RA Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B.,
RA Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R.,
RA Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J.,
RA Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D.,
RA Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S.,
RA Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S.,
RA Mockrin S., Collins F.S.;
RT "Genome sequence of the Brown Norway rat yields insights into mammalian
RT evolution.";
RL Nature 428:493-521(2004).
RN [2] {ECO:0000313|Ensembl:ENSRNOP00000072862.2}
RP IDENTIFICATION.
RC STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000072862.2};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR AlphaFoldDB; A0A0G2K414; -.
DR STRING; 10116.ENSRNOP00000072862; -.
DR Ensembl; ENSRNOT00000080181.2; ENSRNOP00000072862.2; ENSRNOG00000056177.2.
DR AGR; RGD:1585492; -.
DR RGD; 1585492; Ccdc144b.
DR VEuPathDB; HostDB:ENSRNOG00000056177; -.
DR GeneTree; ENSGT00940000153661; -.
DR InParanoid; A0A0G2K414; -.
DR OMA; IEWEHEL; -.
DR Proteomes; UP000002494; Chromosome 2.
DR Bgee; ENSRNOG00000056177; Expressed in testis.
DR InterPro; IPR040118; C144A/B/C.
DR InterPro; IPR021885; DUF3496.
DR PANTHER; PTHR22245:SF3; COILED-COIL DOMAIN-CONTAINING PROTEIN 144A-RELATED; 1.
DR PANTHER; PTHR22245; UNCHARACTERIZED; 1.
DR Pfam; PF12001; DUF3496; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000002494}.
FT DOMAIN 385..486
FT /note="DUF3496"
FT /evidence="ECO:0000259|Pfam:PF12001"
FT COILED 66..265
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 299..333
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 385..447
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 544 AA; 64453 MW; 691950023E7DDD56 CRC64;
MEDLGDLTQS SETASECGKF PSPNYEAILK LIERLSLECK DSGSLLKIQN AVYSYKRLIQ
LKNGHCKVLQ GKLQVVEKEV SGLRKKLTDA EREQLEQEQE LCNVRFTLKQ EEEKRKNVDW
IYNKIKEQLR EKEEQYNKEV KARQKLEIRI RELDVEMKTV RNNLNKVLEE RNCMERQLLQ
EQKARILQDG ILASHLHKQK ELKLAQEKIS SQLQEALEQR RQPSQCATKM QDCVQKLGLE
NHMLKATARK QAEKIEQLKK NLLSEFLSDD LTAKLETATS KCLHLYKQNQ LLQRELLSMK
MIQRKYEKLK KHKKKLEQEI ANLRSHMEQH MIECGQIEQY KWEIEEKTKQ DLVEKLKQVN
LFLQAQAAYE DKLEKLRHKQ NASVRTQMEL RIRDLESEFS KMKSQVDCNQ IEMENYKQLY
LEEVKIRKSL SNKLSKTDER LAEVKTKLLL ERKQNRASQY SMVDIRPVLE STCPRDSNRF
FTPRSFSREN MLSTSNLWLS VETMENCKTK VLQEWERSIT RELRQATAEF ESGLHRTSTE
FTHI
//
