ID A0A0G4F9B5_VITBC Unreviewed; 1237 AA.
AC A0A0G4F9B5;
DT 16-SEP-2015, integrated into UniProtKB/TrEMBL.
DT 16-SEP-2015, sequence version 1.
DT 13-SEP-2023, entry version 42.
DE RecName: Full=SWIRM domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=Vbra_4253 {ECO:0000313|EMBL:CEM09346.1};
OS Vitrella brassicaformis (strain CCMP3155).
OC Eukaryota; Sar; Alveolata; Colpodellida; Vitrellaceae; Vitrella.
OX NCBI_TaxID=1169540 {ECO:0000313|EMBL:CEM09346.1, ECO:0000313|Proteomes:UP000041254};
RN [1] {ECO:0000313|EMBL:CEM09346.1, ECO:0000313|Proteomes:UP000041254}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Zhu J., Qi W., Song R.;
RL Submitted (NOV-2014) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CDMY01000395; CEM09346.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0G4F9B5; -.
DR STRING; 1169540.A0A0G4F9B5; -.
DR VEuPathDB; CryptoDB:Vbra_4253; -.
DR InParanoid; A0A0G4F9B5; -.
DR OMA; TTIDMPD; -.
DR OrthoDB; 10062at2759; -.
DR PhylomeDB; A0A0G4F9B5; -.
DR Proteomes; UP000041254; Unassembled WGS sequence.
DR CDD; cd00167; SANT; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017930; Myb_dom.
DR InterPro; IPR001005; SANT/Myb.
DR InterPro; IPR017884; SANT_dom.
DR InterPro; IPR032450; SMARCC_N.
DR InterPro; IPR007526; SWIRM.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR12802:SF41; BRAHMA ASSOCIATED PROTEIN 155 KDA; 1.
DR PANTHER; PTHR12802; SWI/SNF COMPLEX-RELATED; 1.
DR Pfam; PF00249; Myb_DNA-binding; 1.
DR Pfam; PF04433; SWIRM; 1.
DR Pfam; PF16496; SWIRM-assoc_2; 1.
DR SMART; SM00717; SANT; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS51294; HTH_MYB; 1.
DR PROSITE; PS50090; MYB_LIKE; 1.
DR PROSITE; PS51293; SANT; 1.
DR PROSITE; PS50934; SWIRM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000041254}.
FT DOMAIN 655..756
FT /note="SWIRM"
FT /evidence="ECO:0000259|PROSITE:PS50934"
FT DOMAIN 929..980
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 929..972
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT DOMAIN 932..984
FT /note="SANT"
FT /evidence="ECO:0000259|PROSITE:PS51293"
FT REGION 290..444
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 577..599
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 617..641
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 765..820
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1190..1237
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 326..347
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 364..385
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 420..434
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 617..633
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 792..814
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1212..1231
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1237 AA; 134065 MW; B561D969F6CA8F28 CRC64;
MSQRRKPHAP ADQRNVRNVE DFMVDKYEKV RQELEKVEWI KRDAACNSKT LATLVAHLTL
FMDLNFGAKV PVEQREMTKF PAVLLRDYRP NGALKTILEL CFEFKAQQEG AGSRRFDILT
EKAKPHVIQL CRQIFDRIKA DGHWKPPKVF FWTGQGGVTA EDVERCTALV SKHHGVVVGT
IKEATHIVVS DACNPDFNPS DPESYFRTIE RMRTDLGKNF NLIHWWYHPD SYDVWVQGSA
DDEIETPIRP PDGIWKVGMT FITHLETFNE WMNEADYEII EAHLPPPLLA HLGQASGKRP
QPVQTRQKRQ KASHAHEGEP PTPSEAPSGK REKRKSRKAR DAESVASDDT AGKAAGSMRL
RVHKTPPPAR EAPGEESERP RGMVTRDSLK PSQGHSRSRV GGVDRVKARK SAPGGRGAEG
AEARRPEKKR KVHGGAGILP RVHGPTDLSG GAGMVLDAAG GGVQPMLLLQ QQQQPQHLHA
LRLRCNPSIY HPTKCKVIGR PEGEAPPVLD PETLAQLDYG EVLPEVAAFV REHCKDVRMK
AQLPTIIEKA TDGMDVDGVV TERFHAPPLP PELCSPSVVS DEVSSASPDG APLAKRSHAR
WTQTVTREGG LLVTLPLPPS GPPVPPDLPP PPQNTELNGA EAARPASASE VPVTIQLPSF
ADWFDTDSVH NIEMQHLGGF FGAYEDGEGL EETKRRYVAV RNAIVERYRM NPRKYLSATE
CRRFIDGDAL LVLQIHSFLD FWGVINFQAD PSTLPLKTRK LREDTVPQPA ATTTGGPSQP
APARPIGRIG QPQPQPGTQP TMGIHQQGPS AAASASQGGV GWRPGVGAGA GVGGATNVTT
LASTGQRYAL PKVPEGPPGP KKCVSCGKIC LYSFYVVRKT AGAPALSTGV LSRCAWCELC
YREGLLPPNL LPSQLRKVTV PLSGSQDGRP DASGTMWTEH ETMRLIEGLE LYGDSWDEVA
SHVGNGKTAS QCIMHFVALP IEEETPLPPT ATAAAGMGIG RERGMDSRSL AAMLTSMRER
RDESAVDYMM KQLAGLASVV DPKLVTAAIN AALEEARKEN LVPPQIEARY RPVMAHPLPP
RSHPQIPHQQ HTFMHTRAAA VGIGNGPRPP APPAMMPIAA SSAPAAAAAA AAVAVKDKGG
DTLMSTTNHN GTTVQQPPSV VASAVSAGVV GAMPVVGLVA AAREDQQARA GGEALLAQQK
ERIDDKMRQI RASGQGQEQQ QQQQGQREVR PDGPGQS
//